BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

449 related articles for article (PubMed ID: 17190566)

  • 1. The simulation of the three-dimensional lattice hydrophobic-polar protein folding.
    Guo YZ; Feng EM
    J Chem Phys; 2006 Dec; 125(23):234703. PubMed ID: 17190566
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Optimal HP configurations of proteins by combining local search with elastic net algorithm.
    Guo YZ; Feng EM; Wang Y
    J Biochem Biophys Methods; 2007 Apr; 70(3):335-40. PubMed ID: 16982100
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Exploration of two-dimensional hydrophobic-polar lattice model by combining local search with elastic net algorithm.
    Guo YZ; Feng EM; Wang Y
    J Chem Phys; 2006 Oct; 125(15):154102. PubMed ID: 17059234
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Folding with downhill behavior and low cooperativity of proteins.
    Zuo G; Wang J; Wang W
    Proteins; 2006 Apr; 63(1):165-73. PubMed ID: 16416404
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Heuristic energy landscape paving for protein folding problem in the three-dimensional HP lattice model.
    Liu J; Li G; Yu J; Yao Y
    Comput Biol Chem; 2012 Jun; 38():17-26. PubMed ID: 22551826
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A study of density of states and ground states in hydrophobic-hydrophilic protein folding models by equi-energy sampling.
    Kou SC; Oh J; Wong WH
    J Chem Phys; 2006 Jun; 124(24):244903. PubMed ID: 16821999
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genetic algorithms for protein folding simulations.
    Unger R; Moult J
    J Mol Biol; 1993 May; 231(1):75-81. PubMed ID: 8496967
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Lattices for ab initio protein structure prediction.
    Pierri CL; De Grassi A; Turi A
    Proteins; 2008 Nov; 73(2):351-61. PubMed ID: 18433064
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A new branch and bound method for the protein folding problem under the 2D-HP model.
    Hsieh SY; Lai DW
    IEEE Trans Nanobioscience; 2011 Jun; 10(2):69-75. PubMed ID: 21742572
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Exact sequence analysis for three-dimensional hydrophobic-polar lattice proteins.
    Schiemann R; Bachmann M; Janke W
    J Chem Phys; 2005 Mar; 122(11):114705. PubMed ID: 15836241
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Routes are trees: the parsing perspective on protein folding.
    Hockenmaier J; Joshi AK; Dill KA
    Proteins; 2007 Jan; 66(1):1-15. PubMed ID: 17063473
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Monte Carlo simulation of protein folding in the presence of residue-specific binding sites.
    Rossinsky E; Srebnik S
    Biopolymers; 2005 Dec; 79(5):259-68. PubMed ID: 16134169
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein Folding Prediction in a Cubic Lattice in Hydrophobic-Polar Model.
    Yanev N; Traykov M; Milanov P; Yurukov B
    J Comput Biol; 2017 May; 24(5):412-421. PubMed ID: 27901606
    [TBL] [Abstract][Full Text] [Related]  

  • 14. New method for protein secondary structure assignment based on a simple topological descriptor.
    Taylor T; Rivera M; Wilson G; Vaisman II
    Proteins; 2005 Aug; 60(3):513-24. PubMed ID: 15887224
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The Noncompacted Folding of Proteins by Modified Elastic Net Algorithm.
    Guo Y
    J Comput Biol; 2015 Jul; 22(7):609-18. PubMed ID: 26161596
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Local-structural diversity and protein folding: application to all-beta off-lattice protein models.
    Pan PW; Gordon HL; Rothstein SM
    J Chem Phys; 2006 Jan; 124(2):024905. PubMed ID: 16422646
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Stochastic protein folding simulation in the three-dimensional HP-model.
    Albrecht AA; Skaliotis A; Steinhöfel K
    Comput Biol Chem; 2008 Aug; 32(4):248-55. PubMed ID: 18485827
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The elastic net algorithm and protein structure prediction.
    Ball KD; Erman B; Dill KA
    J Comput Chem; 2002 Jan; 23(1):77-83. PubMed ID: 11913391
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accurate prediction for atomic-level protein design and its application in diversifying the near-optimal sequence space.
    Fromer M; Yanover C
    Proteins; 2009 May; 75(3):682-705. PubMed ID: 19003998
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A correlation-based method for the enhancement of scoring functions on funnel-shaped energy landscapes.
    Stumpff-Kane AW; Feig M
    Proteins; 2006 Apr; 63(1):155-64. PubMed ID: 16397892
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 23.