330 related articles for article (PubMed ID: 17201057)
1. [DNA structure from A to Z--biological implications of structural diversity of DNA].
Bukowiecka-Matusiak M; Woźniak LA
Postepy Biochem; 2006; 52(3):229-38. PubMed ID: 17201057
[TBL] [Abstract][Full Text] [Related]
2. Structural properties of hybrid triplex of polycation deoxyribonucleic S-methylthiourea (DNmt) strands with a complementary DNA strand, probed by nanosecond molecular dynamics.
Luo J; Bruice TC
J Biomol Struct Dyn; 2000 Feb; 17(4):629-43. PubMed ID: 10698101
[TBL] [Abstract][Full Text] [Related]
3. Novel drug discovery and molecular biological methods, via DNA, RNA and protein changes using structure-function transitions: Transitional structural chemogenomics, transitional structural chemoproteomics and novel multi-stranded nucleic acid microarray.
Gagna CE; Lambert WC
Med Hypotheses; 2006; 67(5):1099-114. PubMed ID: 16828979
[TBL] [Abstract][Full Text] [Related]
4. A thermodynamic approach for the targeting of nucleic acid structures using their complementary single strands.
Lee HT; Carr C; Siebler H; Waters L; Khutsishvili I; Iseka F; Domack B; Olsen CM; Marky LA
Methods Enzymol; 2011; 492():1-26. PubMed ID: 21333787
[TBL] [Abstract][Full Text] [Related]
5. Base triplet nonisomorphism strongly influences DNA triplex conformation: effect of nonisomorphic G* GC and A* AT triplets and bending of DNA triplexes.
Rathinavelan T; Yathindra N
Biopolymers; 2006 Aug; 82(5):443-61. PubMed ID: 16493655
[TBL] [Abstract][Full Text] [Related]
6. Model building program HLX4: application to non-classical helical structures.
Fujii S; Yamashita T
Nucleic Acids Symp Ser; 1993; (29):187-8. PubMed ID: 8247762
[TBL] [Abstract][Full Text] [Related]
7. Porphyrin intercalation in G4-DNA quadruplexes by molecular dynamics simulations.
Cavallari M; Garbesi A; Di Felice R
J Phys Chem B; 2009 Oct; 113(40):13152-60. PubMed ID: 19754127
[TBL] [Abstract][Full Text] [Related]
8. DNA nanomachines and nanostructures involving quadruplexes.
Alberti P; Bourdoncle A; Saccà B; Lacroix L; Mergny JL
Org Biomol Chem; 2006 Sep; 4(18):3383-91. PubMed ID: 17036128
[TBL] [Abstract][Full Text] [Related]
9. Sequence-dependent DNA structure: dinucleotide conformational maps.
Packer MJ; Dauncey MP; Hunter CA
J Mol Biol; 2000 Jan; 295(1):71-83. PubMed ID: 10623509
[TBL] [Abstract][Full Text] [Related]
10. Symmetry selection in artificial DNA base pairs.
Jishi RA; Bragin J
J Phys Chem B; 2007 May; 111(19):5357-61. PubMed ID: 17432895
[TBL] [Abstract][Full Text] [Related]
11. Multidisciplinary experimental approaches to characterizing biomolecular dynamics.
Romesberg FE
Chembiochem; 2003 Jul; 4(7):563-71. PubMed ID: 12851924
[No Abstract] [Full Text] [Related]
12. Dynamics and energetics of the base flipping conformation studied with base pair-mimic nucleosides.
Nakano S; Oka H; Uotani Y; Uenishi K; Fujii M; Sugimoto N
Biochemistry; 2009 Dec; 48(47):11304-11. PubMed ID: 19839646
[TBL] [Abstract][Full Text] [Related]
13. Folding of single-stranded DNA quadruplexes containing an autonomously stable mini-hairpin loop.
Balkwill GD; Garner TP; Searle MS
Mol Biosyst; 2009 May; 5(5):542-7. PubMed ID: 19381368
[TBL] [Abstract][Full Text] [Related]
14. Transition between B-DNA and Z-DNA: free energy landscape for the B-Z junction propagation.
Lee J; Kim YG; Kim KK; Seok C
J Phys Chem B; 2010 Aug; 114(30):9872-81. PubMed ID: 20666528
[TBL] [Abstract][Full Text] [Related]
15. Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Ha SC; Lowenhaupt K; Rich A; Kim YG; Kim KK
Nature; 2005 Oct; 437(7062):1183-6. PubMed ID: 16237447
[TBL] [Abstract][Full Text] [Related]
16. Double-helical --> ladder structural transition in the B-DNA is induced by a loss of dispersion energy.
Cerný J; Kabelác M; Hobza P
J Am Chem Soc; 2008 Nov; 130(47):16055-9. PubMed ID: 18975944
[TBL] [Abstract][Full Text] [Related]
17. [Parallel-stranded DNA with natural base sequences].
Shchelkina AK; Borisova OF; Livshits MA; Jovin TM
Mol Biol (Mosk); 2003; 37(2):255-65. PubMed ID: 12723473
[TBL] [Abstract][Full Text] [Related]
18. Solution structure of xDNA: a paired genetic helix with increased diameter.
Liu H; Lynch SR; Kool ET
J Am Chem Soc; 2004 Jun; 126(22):6900-5. PubMed ID: 15174859
[TBL] [Abstract][Full Text] [Related]
19. Stabilization by extra-helical thymines of a DNA duplex with Hoogsteen base pairs.
Pous J; Urpí L; Subirana JA; Gouyette C; Navaza J; Campos JL
J Am Chem Soc; 2008 May; 130(21):6755-60. PubMed ID: 18447354
[TBL] [Abstract][Full Text] [Related]
20. Structural stability and length of I-motif of G-quartet in DNA octaplex.
Mitomi K; Ciengshin T; Kondo J; Takénaka A
Nucleic Acids Symp Ser (Oxf); 2004; (48):121-2. PubMed ID: 17150508
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
