BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

465 related articles for article (PubMed ID: 17201929)

  • 1. Detection of weakly conserved ancestral mammalian regulatory sequences by primate comparisons.
    Wang QF; Prabhakar S; Chanan S; Cheng JF; Rubin EM; Boffelli D
    Genome Biol; 2007; 8(1):R1. PubMed ID: 17201929
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Close sequence comparisons are sufficient to identify human cis-regulatory elements.
    Prabhakar S; Poulin F; Shoukry M; Afzal V; Rubin EM; Couronne O; Pennacchio LA
    Genome Res; 2006 Jul; 16(7):855-63. PubMed ID: 16769978
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Phylogenetic shadowing of primate sequences to find functional regions of the human genome.
    Boffelli D; McAuliffe J; Ovcharenko D; Lewis KD; Ovcharenko I; Pachter L; Rubin EM
    Science; 2003 Feb; 299(5611):1391-4. PubMed ID: 12610304
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evidence for turnover of functional noncoding DNA in mammalian genome evolution.
    Smith NG; Brandström M; Ellegren H
    Genomics; 2004 Nov; 84(5):806-13. PubMed ID: 15475259
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Primate-specific evolution of an LDLR enhancer.
    Wang QF; Prabhakar S; Wang Q; Moses AM; Chanan S; Brown M; Eisen MB; Cheng JF; Rubin EM; Boffelli D
    Genome Biol; 2006; 7(8):R68. PubMed ID: 16884525
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Distribution and intensity of constraint in mammalian genomic sequence.
    Cooper GM; Stone EA; Asimenos G; ; Green ED; Batzoglou S; Sidow A
    Genome Res; 2005 Jul; 15(7):901-13. PubMed ID: 15965027
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Noncoding sequences conserved in a limited number of mammals in the SIM2 interval are frequently functional.
    Frazer KA; Tao H; Osoegawa K; de Jong PJ; Chen X; Doherty MF; Cox DR
    Genome Res; 2004 Mar; 14(3):367-72. PubMed ID: 14962988
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Identification of constrained sequence elements across 239 primate genomes.
    Kuderna LFK; Ulirsch JC; Rashid S; Ameen M; Sundaram L; Hickey G; Cox AJ; Gao H; Kumar A; Aguet F; Christmas MJ; Clawson H; Haeussler M; Janiak MC; Kuhlwilm M; Orkin JD; Bataillon T; Manu S; Valenzuela A; Bergman J; Rouselle M; Silva FE; Agueda L; Blanc J; Gut M; de Vries D; Goodhead I; Harris RA; Raveendran M; Jensen A; Chuma IS; Horvath JE; Hvilsom C; Juan D; Frandsen P; Schraiber JG; de Melo FR; Bertuol F; Byrne H; Sampaio I; Farias I; Valsecchi J; Messias M; da Silva MNF; Trivedi M; Rossi R; Hrbek T; Andriaholinirina N; Rabarivola CJ; Zaramody A; Jolly CJ; Phillips-Conroy J; Wilkerson G; Abee C; Simmons JH; Fernandez-Duque E; Kanthaswamy S; Shiferaw F; Wu D; Zhou L; Shao Y; Zhang G; Keyyu JD; Knauf S; Le MD; Lizano E; Merker S; Navarro A; Nadler T; Khor CC; Lee J; Tan P; Lim WK; Kitchener AC; Zinner D; Gut I; Melin AD; Guschanski K; Schierup MH; Beck RMD; Karakikes I; Wang KC; Umapathy G; Roos C; Boubli JP; Siepel A; Kundaje A; Paten B; Lindblad-Toh K; Rogers J; Marques Bonet T; Farh KK
    Nature; 2024 Jan; 625(7996):735-742. PubMed ID: 38030727
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Heterogeneous tempo and mode of conserved noncoding sequence evolution among four mammalian orders.
    Babarinde IA; Saitou N
    Genome Biol Evol; 2013; 5(12):2330-43. PubMed ID: 24259317
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Unusual sequence characteristics of human chromosome 19 are conserved across 11 nonhuman primates.
    Harris RA; Raveendran M; Worley KC; Rogers J
    BMC Evol Biol; 2020 Feb; 20(1):33. PubMed ID: 32106815
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs).
    Dermitzakis ET; Reymond A; Scamuffa N; Ucla C; Kirkness E; Rossier C; Antonarakis SE
    Science; 2003 Nov; 302(5647):1033-5. PubMed ID: 14526086
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Functionally conserved cis-regulatory elements of COL18A1 identified through zebrafish transgenesis.
    Kague E; Bessling SL; Lee J; Hu G; Passos-Bueno MR; Fisher S
    Dev Biol; 2010 Jan; 337(2):496-505. PubMed ID: 19895802
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Multigenome DNA sequence conservation identifies Hox cis-regulatory elements.
    Kuntz SG; Schwarz EM; DeModena JA; De Buysscher T; Trout D; Shizuya H; Sternberg PW; Wold BJ
    Genome Res; 2008 Dec; 18(12):1955-68. PubMed ID: 18981268
    [TBL] [Abstract][Full Text] [Related]  

  • 14. "Reverse Genomics" Predicts Function of Human Conserved Noncoding Elements.
    Marcovitz A; Jia R; Bejerano G
    Mol Biol Evol; 2016 May; 33(5):1358-69. PubMed ID: 26744417
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SMASHing regulatory sites in DNA by human-mouse sequence comparisons.
    Zavolan M; Socci ND; Rajewsky N; Gaasterlamd T
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():277-86. PubMed ID: 16452803
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions.
    Bagheri-Fam S; Ferraz C; Demaille J; Scherer G; Pfeifer D
    Genomics; 2001 Nov; 78(1-2):73-82. PubMed ID: 11707075
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Hundreds of conserved non-coding genomic regions are independently lost in mammals.
    Hiller M; Schaar BT; Bejerano G
    Nucleic Acids Res; 2012 Dec; 40(22):11463-76. PubMed ID: 23042682
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evolution of an X-linked primate-specific micro RNA cluster.
    Li J; Liu Y; Dong D; Zhang Z
    Mol Biol Evol; 2010 Mar; 27(3):671-83. PubMed ID: 19933172
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Identification and characterization of lineage-specific highly conserved noncoding sequences in Mammalian genomes.
    Takahashi M; Saitou N
    Genome Biol Evol; 2012; 4(5):641-57. PubMed ID: 22505575
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes.
    Punnamoottil B; Herrmann C; Pascual-Anaya J; D'Aniello S; Garcia-Fernàndez J; Akalin A; Becker TS; Rinkwitz S
    Dev Biol; 2010 Apr; 340(2):269-82. PubMed ID: 20144609
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 24.