BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

310 related articles for article (PubMed ID: 17202159)

  • 1. TRED: a transcriptional regulatory element database, new entries and other development.
    Jiang C; Xuan Z; Zhao F; Zhang MQ
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D137-40. PubMed ID: 17202159
    [TBL] [Abstract][Full Text] [Related]  

  • 2. TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies.
    Zhao F; Xuan Z; Liu L; Zhang MQ
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D103-7. PubMed ID: 15608156
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MPromDb: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-chip experimental data.
    Sun H; Palaniswamy SK; Pohar TT; Jin VX; Huang TH; Davuluri RV
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D98-103. PubMed ID: 16381984
    [TBL] [Abstract][Full Text] [Related]  

  • 4. AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors.
    Davuluri RV; Sun H; Palaniswamy SK; Matthews N; Molina C; Kurtz M; Grotewold E
    BMC Bioinformatics; 2003 Jun; 4():25. PubMed ID: 12820902
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PReMod: a database of genome-wide mammalian cis-regulatory module predictions.
    Ferretti V; Poitras C; Bergeron D; Coulombe B; Robert F; Blanchette M
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D122-6. PubMed ID: 17148480
    [TBL] [Abstract][Full Text] [Related]  

  • 6. PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants.
    Chow CN; Zheng HQ; Wu NY; Chien CH; Huang HD; Lee TY; Chiang-Hsieh YF; Hou PF; Yang TY; Chang WC
    Nucleic Acids Res; 2016 Jan; 44(D1):D1154-60. PubMed ID: 26476450
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ABS: a database of Annotated regulatory Binding Sites from orthologous promoters.
    Blanco E; Farré D; Albà MM; Messeguer X; Guigó R
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D63-7. PubMed ID: 16381947
    [TBL] [Abstract][Full Text] [Related]  

  • 8. GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs.
    Jegga AG; Chen J; Gowrisankar S; Deshmukh MA; Gudivada R; Kong S; Kaimal V; Aronow BJ
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D116-21. PubMed ID: 17178752
    [TBL] [Abstract][Full Text] [Related]  

  • 9. AtPAN: an integrated system for reconstructing transcriptional regulatory networks in Arabidopsis thaliana.
    Chen YA; Wen YC; Chang WC
    BMC Genomics; 2012 Mar; 13():85. PubMed ID: 22397531
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ITFP: an integrated platform of mammalian transcription factors.
    Zheng G; Tu K; Yang Q; Xiong Y; Wei C; Xie L; Zhu Y; Li Y
    Bioinformatics; 2008 Oct; 24(20):2416-7. PubMed ID: 18713790
    [TBL] [Abstract][Full Text] [Related]  

  • 11. KBERG: KnowledgeBase for Estrogen Responsive Genes.
    Tang S; Zhang Z; Tan SL; Tang MH; Kumar AP; Ramadoss SK; Bajic VB
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D732-6. PubMed ID: 17090589
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants.
    Chow CN; Lee TY; Hung YC; Li GZ; Tseng KC; Liu YH; Kuo PL; Zheng HQ; Chang WC
    Nucleic Acids Res; 2019 Jan; 47(D1):D1155-D1163. PubMed ID: 30395277
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network.
    Hosseinpour B; Bakhtiarizadeh MR; Khosravi P; Ebrahimie E
    Gene; 2013 Dec; 531(2):212-9. PubMed ID: 24042128
    [TBL] [Abstract][Full Text] [Related]  

  • 14. GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Yilmaz A; Nishiyama MY; Fuentes BG; Souza GM; Janies D; Gray J; Grotewold E
    Plant Physiol; 2009 Jan; 149(1):171-80. PubMed ID: 18987217
    [TBL] [Abstract][Full Text] [Related]  

  • 15. HemoPDB: Hematopoiesis Promoter Database, an information resource of transcriptional regulation in blood cell development.
    Pohar TT; Sun H; Davuluri RV
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D86-90. PubMed ID: 14681365
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Bioinformatics tools for modeling transcription factor target genes and epigenetic changes.
    Davuluri RV
    Methods Mol Biol; 2007; 408():129-51. PubMed ID: 18314581
    [TBL] [Abstract][Full Text] [Related]  

  • 17. AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks.
    Palaniswamy SK; James S; Sun H; Lamb RS; Davuluri RV; Grotewold E
    Plant Physiol; 2006 Mar; 140(3):818-29. PubMed ID: 16524982
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CRSD: a comprehensive web server for composite regulatory signature discovery.
    Liu CC; Lin CC; Chen WS; Chen HY; Chang PC; Chen JJ; Yang PC
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W571-7. PubMed ID: 16845073
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ChIP-Array 2: integrating multiple omics data to construct gene regulatory networks.
    Wang P; Qin J; Qin Y; Zhu Y; Wang LY; Li MJ; Zhang MQ; Wang J
    Nucleic Acids Res; 2015 Jul; 43(W1):W264-9. PubMed ID: 25916854
    [TBL] [Abstract][Full Text] [Related]  

  • 20. From promoter analysis to transcriptional regulatory network prediction using PAINT.
    Gonye GE; Chakravarthula P; Schwaber JS; Vadigepalli R
    Methods Mol Biol; 2007; 408():49-68. PubMed ID: 18314577
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.