These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

68 related articles for article (PubMed ID: 17206856)

  • 21. Prediction of protein secondary structure by combining nearest-neighbor algorithms and multiple sequence alignments.
    Salamov AA; Solovyev VV
    J Mol Biol; 1995 Mar; 247(1):11-5. PubMed ID: 7897654
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Predicting protein secondary structure by a support vector machine based on a new coding scheme.
    Wang LH; Liu J; Li YF; Zhou HB
    Genome Inform; 2004; 15(2):181-90. PubMed ID: 15706504
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Improved identification of outer membrane beta barrel proteins using primary sequence, predicted secondary structure, and evolutionary information.
    Mizianty MJ; Kurgan L
    Proteins; 2011 Jan; 79(1):294-303. PubMed ID: 21064129
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Using amino acid and peptide composition to predict membrane protein types.
    Yang XG; Luo RY; Feng ZP
    Biochem Biophys Res Commun; 2007 Feb; 353(1):164-9. PubMed ID: 17174938
    [TBL] [Abstract][Full Text] [Related]  

  • 25. The effects of the side chains of hydrophobic aliphatic amino acid residues in an amphipathic polypeptide on the formation of alpha helix and its association.
    Takei T; Okonogi A; Tateno K; Kimura A; Kojima S; Yazaki K; Miura K
    J Biochem; 2006 Feb; 139(2):271-8. PubMed ID: 16452315
    [TBL] [Abstract][Full Text] [Related]  

  • 26. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Structure of the soluble domain of a membrane-anchored thioredoxin-like protein from Bradyrhizobium japonicum reveals unusual properties.
    Capitani G; Rossmann R; Sargent DF; Grütter MG; Richmond TJ; Hennecke H
    J Mol Biol; 2001 Aug; 311(5):1037-48. PubMed ID: 11531338
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Predicting alpha-helix and beta-strand segments of globular proteins.
    Solovyev VV; Salamov AA
    Comput Appl Biosci; 1994 Dec; 10(6):661-9. PubMed ID: 7704665
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Enhanced membrane protein topology prediction using a hierarchical classification method and a new scoring function.
    Lo A; Chiu HS; Sung TY; Lyu PC; Hsu WL
    J Proteome Res; 2008 Feb; 7(2):487-96. PubMed ID: 18081245
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Secondary structure characterization based on amino acid composition and availability in proteins.
    Otaki JM; Tsutsumi M; Gotoh T; Yamamoto H
    J Chem Inf Model; 2010 Apr; 50(4):690-700. PubMed ID: 20210310
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Protein secondary structure prediction using nearest-neighbor methods.
    Yi TM; Lander ES
    J Mol Biol; 1993 Aug; 232(4):1117-29. PubMed ID: 8371270
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Quadratic minimization of predictors for protein secondary structure. Application to transmembrane alpha-helices.
    Edelman J
    J Mol Biol; 1993 Jul; 232(1):165-91. PubMed ID: 7687296
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A novel method of protein secondary structure prediction with high segment overlap measure: support vector machine approach.
    Hua S; Sun Z
    J Mol Biol; 2001 Apr; 308(2):397-407. PubMed ID: 11327775
    [TBL] [Abstract][Full Text] [Related]  

  • 34. ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins.
    Granseth E; Viklund H; Elofsson A
    Bioinformatics; 2006 Jul; 22(14):e191-6. PubMed ID: 16873471
    [TBL] [Abstract][Full Text] [Related]  

  • 35. [A turning point in the knowledge of the structure-function-activity relations of elastin].
    Alix AJ
    J Soc Biol; 2001; 195(2):181-93. PubMed ID: 11727705
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Application of residue distribution along the sequence for discriminating outer membrane proteins.
    Gromiha MM; Ahmad S; Suwa M
    Comput Biol Chem; 2005 Apr; 29(2):135-42. PubMed ID: 15833441
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Solution structure of amyloid beta-peptide(1-40) in a water-micelle environment. Is the membrane-spanning domain where we think it is?
    Coles M; Bicknell W; Watson AA; Fairlie DP; Craik DJ
    Biochemistry; 1998 Aug; 37(31):11064-77. PubMed ID: 9693002
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Multiple sequence threading: an analysis of alignment quality and stability.
    Taylor WR
    J Mol Biol; 1997 Jun; 269(5):902-43. PubMed ID: 9223650
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Simultaneous prediction of protein secondary structure and transmembrane spans.
    Leman JK; Mueller R; Karakas M; Woetzel N; Meiler J
    Proteins; 2013 Jul; 81(7):1127-40. PubMed ID: 23349002
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Identification of beta-barrel membrane proteins based on amino acid composition properties and predicted secondary structure.
    Liu Q; Zhu Y; Wang B; Li Y
    Comput Biol Chem; 2003 Jul; 27(3):355-61. PubMed ID: 12927109
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 4.