586 related articles for article (PubMed ID: 17237036)
21. Representation in stochastic search for phylogenetic tree reconstruction.
Weber G; Ohno-Machado L; Shieber S
J Biomed Inform; 2006 Feb; 39(1):43-50. PubMed ID: 16359929
[TBL] [Abstract][Full Text] [Related]
22. An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics.
Brinkmann H; van der Giezen M; Zhou Y; Poncelin de Raucourt G; Philippe H
Syst Biol; 2005 Oct; 54(5):743-57. PubMed ID: 16243762
[TBL] [Abstract][Full Text] [Related]
23. Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification.
Jones CM; Stres B; Rosenquist M; Hallin S
Mol Biol Evol; 2008 Sep; 25(9):1955-66. PubMed ID: 18614527
[TBL] [Abstract][Full Text] [Related]
24. Phylogenomics reveal a robust fungal tree of life.
Kuramae EE; Robert V; Snel B; Weiss M; Boekhout T
FEMS Yeast Res; 2006 Dec; 6(8):1213-20. PubMed ID: 17156018
[TBL] [Abstract][Full Text] [Related]
25. Different phylogenomic approaches to resolve the evolutionary relationships among model fish species.
Negrisolo E; Kuhl H; Forcato C; Vitulo N; Reinhardt R; Patarnello T; Bargelloni L
Mol Biol Evol; 2010 Dec; 27(12):2757-74. PubMed ID: 20591844
[TBL] [Abstract][Full Text] [Related]
26. Detecting non-orthology in the COGs database and other approaches grouping orthologs using genome-specific best hits.
Dessimoz C; Boeckmann B; Roth AC; Gonnet GH
Nucleic Acids Res; 2006; 34(11):3309-16. PubMed ID: 16835308
[TBL] [Abstract][Full Text] [Related]
27. A phylogenomic analysis of the Ascomycota.
Robbertse B; Reeves JB; Schoch CL; Spatafora JW
Fungal Genet Biol; 2006 Oct; 43(10):715-25. PubMed ID: 16781175
[TBL] [Abstract][Full Text] [Related]
28. Automatic clustering of orthologs and inparalogs shared by multiple proteomes.
Alexeyenko A; Tamas I; Liu G; Sonnhammer EL
Bioinformatics; 2006 Jul; 22(14):e9-15. PubMed ID: 16873526
[TBL] [Abstract][Full Text] [Related]
29. Maximum likelihood of phylogenetic networks.
Jin G; Nakhleh L; Snir S; Tuller T
Bioinformatics; 2006 Nov; 22(21):2604-11. PubMed ID: 16928736
[TBL] [Abstract][Full Text] [Related]
30. BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
Luo Y; Fu C; Zhang DY; Lin K
BMC Bioinformatics; 2007 Jul; 8():266. PubMed ID: 17650344
[TBL] [Abstract][Full Text] [Related]
31. Robust inference of positive selection from recombining coding sequences.
Scheffler K; Martin DP; Seoighe C
Bioinformatics; 2006 Oct; 22(20):2493-9. PubMed ID: 16895925
[TBL] [Abstract][Full Text] [Related]
32. Making the most of mitochondrial genomes--markers for phylogeny, molecular ecology and barcodes in Schistosoma (Platyhelminthes: Digenea).
Zarowiecki MZ; Huyse T; Littlewood DT
Int J Parasitol; 2007 Oct; 37(12):1401-18. PubMed ID: 17570370
[TBL] [Abstract][Full Text] [Related]
33. Phylogenomic networks.
Dagan T
Trends Microbiol; 2011 Oct; 19(10):483-91. PubMed ID: 21820313
[TBL] [Abstract][Full Text] [Related]
34. Supertree bootstrapping methods for assessing phylogenetic variation among genes in genome-scale data sets.
Burleigh JG; Driskell AC; Sanderson MJ
Syst Biol; 2006 Jun; 55(3):426-40. PubMed ID: 16861207
[TBL] [Abstract][Full Text] [Related]
35. Phylogenomics of eukaryotes: impact of missing data on large alignments.
Philippe H; Snell EA; Bapteste E; Lopez P; Holland PW; Casane D
Mol Biol Evol; 2004 Sep; 21(9):1740-52. PubMed ID: 15175415
[TBL] [Abstract][Full Text] [Related]
36. OMA Browser--exploring orthologous relations across 352 complete genomes.
Schneider A; Dessimoz C; Gonnet GH
Bioinformatics; 2007 Aug; 23(16):2180-2. PubMed ID: 17545180
[TBL] [Abstract][Full Text] [Related]
37. Support for the monophyletic origin of Gnathifera from phylogenomics.
Witek A; Herlyn H; Ebersberger I; Mark Welch DB; Hankeln T
Mol Phylogenet Evol; 2009 Dec; 53(3):1037-41. PubMed ID: 19654049
[TBL] [Abstract][Full Text] [Related]
38. Bacterial molecular phylogeny using supertree approach.
Daubin V; Gouy M; Perrière G
Genome Inform; 2001; 12():155-64. PubMed ID: 11791234
[TBL] [Abstract][Full Text] [Related]
39. Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterion.
Birin H; Gal-Or Z; Elias I; Tuller T
Bioinformatics; 2008 Mar; 24(6):826-32. PubMed ID: 18203769
[TBL] [Abstract][Full Text] [Related]
40. FUNYBASE: a FUNgal phYlogenomic dataBASE.
Marthey S; Aguileta G; Rodolphe F; Gendrault A; Giraud T; Fournier E; Lopez-Villavicencio M; Gautier A; Lebrun MH; Chiapello H
BMC Bioinformatics; 2008 Oct; 9():456. PubMed ID: 18954438
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
