1616 related articles for article (PubMed ID: 17255551)
1. MEGAN analysis of metagenomic data.
Huson DH; Auch AF; Qi J; Schuster SC
Genome Res; 2007 Mar; 17(3):377-86. PubMed ID: 17255551
[TBL] [Abstract][Full Text] [Related]
2. Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
Mavromatis K; Ivanova N; Barry K; Shapiro H; Goltsman E; McHardy AC; Rigoutsos I; Salamov A; Korzeniewski F; Land M; Lapidus A; Grigoriev I; Richardson P; Hugenholtz P; Kyrpides NC
Nat Methods; 2007 Jun; 4(6):495-500. PubMed ID: 17468765
[TBL] [Abstract][Full Text] [Related]
3. Metagenomics: read length matters.
Wommack KE; Bhavsar J; Ravel J
Appl Environ Microbiol; 2008 Mar; 74(5):1453-63. PubMed ID: 18192407
[TBL] [Abstract][Full Text] [Related]
4. Environmental genome shotgun sequencing of the Sargasso Sea.
Venter JC; Remington K; Heidelberg JF; Halpern AL; Rusch D; Eisen JA; Wu D; Paulsen I; Nelson KE; Nelson W; Fouts DE; Levy S; Knap AH; Lomas MW; Nealson K; White O; Peterson J; Hoffman J; Parsons R; Baden-Tillson H; Pfannkoch C; Rogers YH; Smith HO
Science; 2004 Apr; 304(5667):66-74. PubMed ID: 15001713
[TBL] [Abstract][Full Text] [Related]
5. SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences.
Monzoorul Haque M; Ghosh TS; Komanduri D; Mande SS
Bioinformatics; 2009 Jul; 25(14):1722-30. PubMed ID: 19439565
[TBL] [Abstract][Full Text] [Related]
6. MetaSim: a sequencing simulator for genomics and metagenomics.
Richter DC; Ott F; Auch AF; Schmid R; Huson DH
PLoS One; 2008 Oct; 3(10):e3373. PubMed ID: 18841204
[TBL] [Abstract][Full Text] [Related]
7. Get the most out of your metagenome: computational analysis of environmental sequence data.
Raes J; Foerstner KU; Bork P
Curr Opin Microbiol; 2007 Oct; 10(5):490-8. PubMed ID: 17936679
[TBL] [Abstract][Full Text] [Related]
8. ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes.
Kristiansson E; Hugenholtz P; Dalevi D
Bioinformatics; 2009 Oct; 25(20):2737-8. PubMed ID: 19696045
[TBL] [Abstract][Full Text] [Related]
9. Visual and statistical comparison of metagenomes.
Mitra S; Klar B; Huson DH
Bioinformatics; 2009 Aug; 25(15):1849-55. PubMed ID: 19515961
[TBL] [Abstract][Full Text] [Related]
10. Biodiversity assessment: state-of-the-art techniques in phylogenomics and species identification.
Steele PR; Pires JC
Am J Bot; 2011 Mar; 98(3):415-25. PubMed ID: 21613135
[TBL] [Abstract][Full Text] [Related]
11. Microbial community analysis using MEGAN.
Huson DH; Weber N
Methods Enzymol; 2013; 531():465-85. PubMed ID: 24060133
[TBL] [Abstract][Full Text] [Related]
12. Short clones or long clones? A simulation study on the use of paired reads in metagenomics.
Mitra S; Schubach M; Huson DH
BMC Bioinformatics; 2010 Jan; 11 Suppl 1(Suppl 1):S12. PubMed ID: 20122183
[TBL] [Abstract][Full Text] [Related]
13. Genomics and evolution. Shotgun sequencing in the sea: a blast from the past?
Falkowski PG; de Vargas C
Science; 2004 Apr; 304(5667):58-60. PubMed ID: 15066774
[No Abstract] [Full Text] [Related]
14. Assembling full-length rRNA genes from short-read metagenomic sequence datasets using EMIRGE.
Miller CS
Methods Enzymol; 2013; 531():333-52. PubMed ID: 24060129
[TBL] [Abstract][Full Text] [Related]
15. An ORFome assembly approach to metagenomics sequences analysis.
Ye Y; Tang H
Comput Syst Bioinformatics Conf; 2008; 7():3-13. PubMed ID: 19642264
[TBL] [Abstract][Full Text] [Related]
16. Methods for comparative metagenomics.
Huson DH; Richter DC; Mitra S; Auch AF; Schuster SC
BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S12. PubMed ID: 19208111
[TBL] [Abstract][Full Text] [Related]
17. Introduction to the Analysis of Environmental Sequences: Metagenomics with MEGAN.
Bağcı C; Beier S; Górska A; Huson DH
Methods Mol Biol; 2019; 1910():591-604. PubMed ID: 31278678
[TBL] [Abstract][Full Text] [Related]
18. Sequencing and genome assembly using next-generation technologies.
Nagarajan N; Pop M
Methods Mol Biol; 2010; 673():1-17. PubMed ID: 20835789
[TBL] [Abstract][Full Text] [Related]
19. Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.
Straub SC; Parks M; Weitemier K; Fishbein M; Cronn RC; Liston A
Am J Bot; 2012 Feb; 99(2):349-64. PubMed ID: 22174336
[TBL] [Abstract][Full Text] [Related]
20. Introduction to the analysis of environmental sequences: metagenomics with MEGAN.
Huson DH; Mitra S
Methods Mol Biol; 2012; 856():415-29. PubMed ID: 22399469
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
