These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

115 related articles for article (PubMed ID: 17277410)

  • 1. Ortholog clustering on a multipartite graph.
    Vashist A; Kulikowski CA; Muchnik I
    IEEE/ACM Trans Comput Biol Bioinform; 2007; 4(1):17-27. PubMed ID: 17277410
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A graph-based clustering method for a large set of sequences using a graph partitioning algorithm.
    Kawaji H; Yamaguchi Y; Matsuda H; Hashimoto A
    Genome Inform; 2001; 12():93-102. PubMed ID: 11791228
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping.
    Fujibuchi W; Ogata H; Matsuda H; Kanehisa M
    Nucleic Acids Res; 2000 Oct; 28(20):4029-36. PubMed ID: 11024184
    [TBL] [Abstract][Full Text] [Related]  

  • 4. FUNYBASE: a FUNgal phYlogenomic dataBASE.
    Marthey S; Aguileta G; Rodolphe F; Gendrault A; Giraud T; Fournier E; Lopez-Villavicencio M; Gautier A; Lebrun MH; Chiapello H
    BMC Bioinformatics; 2008 Oct; 9():456. PubMed ID: 18954438
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.
    Remm M; Storm CE; Sonnhammer EL
    J Mol Biol; 2001 Dec; 314(5):1041-52. PubMed ID: 11743721
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Hierarchical clustering algorithm for comprehensive orthologous-domain classification in multiple genomes.
    Uchiyama I
    Nucleic Acids Res; 2006; 34(2):647-58. PubMed ID: 16436801
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Extraction of correlated gene clusters by multiple graph comparison.
    Nakaya A; Goto S; Kanehisa M
    Genome Inform; 2001; 12():44-53. PubMed ID: 11791223
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Gene Phylogenies and Orthologous Groups.
    Setubal JC; Stadler PF
    Methods Mol Biol; 2018; 1704():1-28. PubMed ID: 29277861
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Assignment of orthologous genes via genome rearrangement.
    Chen X; Zheng J; Fu Z; Nan P; Zhong Y; Lonardi S; Jiang T
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(4):302-15. PubMed ID: 17044168
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Parallel clustering algorithm for large data sets with applications in bioinformatics.
    Olman V; Mao F; Wu H; Xu Y
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(2):344-52. PubMed ID: 19407357
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MultiMSOAR 2.0: an accurate tool to identify ortholog groups among multiple genomes.
    Shi G; Peng MC; Jiang T
    PLoS One; 2011; 6(6):e20892. PubMed ID: 21712981
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SNAPping up functionally related genes based on context information: a colinearity-free approach.
    Kolesov G; Mewes HW; Frishman D
    J Mol Biol; 2001 Aug; 311(4):639-56. PubMed ID: 11518521
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MSOAR: a high-throughput ortholog assignment system based on genome rearrangement.
    Fu Z; Chen X; Vacic V; Nan P; Zhong Y; Jiang T
    J Comput Biol; 2007 Nov; 14(9):1160-75. PubMed ID: 17990975
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DODO: an efficient orthologous genes assignment tool based on domain architectures. Domain based ortholog detection.
    Chen TW; Wu TH; Ng WV; Lin WC
    BMC Bioinformatics; 2010 Oct; 11 Suppl 7(Suppl 7):S6. PubMed ID: 21106128
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Clustering of gene ontology terms in genomes.
    Tiirikka T; Siermala M; Vihinen M
    Gene; 2014 Oct; 550(2):155-64. PubMed ID: 24995610
    [TBL] [Abstract][Full Text] [Related]  

  • 16. GeneMCL in microarray analysis.
    Samuel Lattimore B; van Dongen S; Crabbe MJ
    Comput Biol Chem; 2005 Oct; 29(5):354-9. PubMed ID: 16172020
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters.
    Ogata H; Fujibuchi W; Goto S; Kanehisa M
    Nucleic Acids Res; 2000 Oct; 28(20):4021-8. PubMed ID: 11024183
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches.
    Kristensen DM; Kannan L; Coleman MK; Wolf YI; Sorokin A; Koonin EV; Mushegian A
    Bioinformatics; 2010 Jun; 26(12):1481-7. PubMed ID: 20439257
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of a Gibbs sampler method for model-based clustering of gene expression data.
    Joshi A; Van de Peer Y; Michoel T
    Bioinformatics; 2008 Jan; 24(2):176-83. PubMed ID: 18033794
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A unified approach for reconstructing ancient gene clusters.
    Stoye J; Wittler R
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(3):387-400. PubMed ID: 19644167
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.