These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

139 related articles for article (PubMed ID: 17279499)

  • 21. Ab initio protein structure prediction with force field parameters derived from water-phase quantum chemical calculation.
    Katagiri D; Fuji H; Neya S; Hoshino T
    J Comput Chem; 2008 Sep; 29(12):1930-44. PubMed ID: 18366016
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Ab initio 3-D structure prediction of an artificially designed three-alpha-helix bundle via all-atom molecular dynamics simulations.
    Breda A; Santos DS; Basso LA; de Souza ON
    Genet Mol Res; 2007 Oct; 6(4):901-10. PubMed ID: 18058711
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Water penetration and escape in proteins.
    García AE; Hummer G
    Proteins; 2000 Feb; 38(3):261-72. PubMed ID: 10713987
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Structural analysis of lead fullerene-based inhibitor bound to human immunodeficiency virus type 1 protease in solution from molecular dynamics simulations.
    Lee VS; Nimmanpipug P; Aruksakunwong O; Promsri S; Sompornpisut P; Hannongbua S
    J Mol Graph Model; 2007 Sep; 26(2):558-70. PubMed ID: 17468026
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Molecular dynamics simulations of epidermal growth factor and transforming growth factor-alpha structures in water.
    Watts CR; Lovas S; Murphy RF
    Proteins; 1998 Nov; 33(3):396-407. PubMed ID: 9829698
    [TBL] [Abstract][Full Text] [Related]  

  • 26. On the application of molecular-dynamics simulations to validate thermal parameters and to optimize TLS-group selection for macromolecular refinement.
    Glykos NM
    Acta Crystallogr D Biol Crystallogr; 2007 Jun; 63(Pt 6):705-13. PubMed ID: 17505109
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Establishing effective simulation protocols for beta- and alpha/beta-peptides. II. Molecular mechanical (MM) model for a cyclic beta-residue.
    Zhu X; Koenig P; Gellman SH; Yethiraj A; Cui Q
    J Phys Chem B; 2008 May; 112(17):5439-48. PubMed ID: 18402479
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Molecular dynamics simulations for water and ions in protein crystals.
    Hu Z; Jiang J
    Langmuir; 2008 Apr; 24(8):4215-23. PubMed ID: 18318554
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Membrane protein structure quality in molecular dynamics simulation.
    Law RJ; Capener C; Baaden M; Bond PJ; Campbell J; Patargias G; Arinaminpathy Y; Sansom MS
    J Mol Graph Model; 2005 Oct; 24(2):157-65. PubMed ID: 16102990
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Static and dynamic water molecules in Cu,Zn superoxide dismutase.
    Falconi M; Brunelli M; Pesce A; Ferrario M; Bolognesi M; Desideri A
    Proteins; 2003 Jun; 51(4):607-15. PubMed ID: 12784219
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Molecular basis of bird respiration: primary hemoglobin structure component from Tufted duck (Aythya fuligula, Anseriformes)--role of alpha99Arg in formation of a complex salt bridge network.
    Abbasi A; Lutfullah G
    Biochem Biophys Res Commun; 2002 Feb; 291(1):176-84. PubMed ID: 11829480
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Native atomic burials, supplemented by physically motivated hydrogen bond constraints, contain sufficient information to determine the tertiary structure of small globular proteins.
    Pereira de Araújo AF; Gomes AL; Bursztyn AA; Shakhnovich EI
    Proteins; 2008 Feb; 70(3):971-83. PubMed ID: 17847091
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Molecular dynamics simulations of hemoglobin A in different states and bound to DPG: effector-linked perturbation of tertiary conformations and HbA concerted dynamics.
    Laberge M; Yonetani T
    Biophys J; 2008 Apr; 94(7):2737-51. PubMed ID: 18096633
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Analysis of the structural and dynamic properties of human N-terminal domain of apolipoprotein E by molecular dynamics simulations.
    Ortmans I; Prévost M
    J Phys Chem B; 2008 Jul; 112(29):8730-6. PubMed ID: 18582019
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Structural characterization of the tunnels of Mycobacterium tuberculosis truncated hemoglobin N from molecular dynamics simulations.
    Daigle R; Guertin M; Lagüe P
    Proteins; 2009 May; 75(3):735-47. PubMed ID: 19003999
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Molecular dynamics simulations of domain motions of substrate-free S-adenosyl- L-homocysteine hydrolase in solution.
    Hu C; Fang J; Borchardt RT; Schowen RL; Kuczera K
    Proteins; 2008 Apr; 71(1):131-43. PubMed ID: 17932938
    [TBL] [Abstract][Full Text] [Related]  

  • 37. The enigma of the liganded hemoglobin end state: a novel quaternary structure of human carbonmonoxy hemoglobin.
    Safo MK; Abraham DJ
    Biochemistry; 2005 Jun; 44(23):8347-59. PubMed ID: 15938624
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Molecular dynamics simulations of the native and partially folded states of ubiquitin: influence of methanol cosolvent, pH, and temperature on the protein structure and dynamics.
    Kony DB; Hünenberger PH; van Gunsteren WF
    Protein Sci; 2007 Jun; 16(6):1101-18. PubMed ID: 17525462
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Backbone conformations and side chain flexibility of two somatostatin mimics investigated by molecular dynamics simulations.
    Interlandi G
    Proteins; 2009 May; 75(3):659-70. PubMed ID: 19003988
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Structural and molecular characterization of the prefoldin beta subunit from Thermococcus strain KS-1.
    Kida H; Sugano Y; Iizuka R; Fujihashi M; Yohda M; Miki K
    J Mol Biol; 2008 Nov; 383(3):465-74. PubMed ID: 18775436
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.