These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

329 related articles for article (PubMed ID: 17288575)

  • 1. SCaFoS: a tool for selection, concatenation and fusion of sequences for phylogenomics.
    Roure B; Rodriguez-Ezpeleta N; Philippe H
    BMC Evol Biol; 2007 Feb; 7 Suppl 1(Suppl 1):S2. PubMed ID: 17288575
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OrthoSelect: a protocol for selecting orthologous groups in phylogenomics.
    Schreiber F; Pick K; Erpenbeck D; Wörheide G; Morgenstern B
    BMC Bioinformatics; 2009 Jul; 10():219. PubMed ID: 19607672
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Assessment of phylogenomic and orthology approaches for phylogenetic inference.
    Dutilh BE; van Noort V; van der Heijden RT; Boekhout T; Snel B; Huynen MA
    Bioinformatics; 2007 Apr; 23(7):815-24. PubMed ID: 17237036
    [TBL] [Abstract][Full Text] [Related]  

  • 5. From phylogenetics to phylogenomics: the evolutionary relationships of insect endosymbiotic gamma-Proteobacteria as a test case.
    Comas I; Moya A; González-Candelas F
    Syst Biol; 2007 Feb; 56(1):1-16. PubMed ID: 17366133
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
    BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Tracing evolutionary pressure.
    Ye K; Vriend G; IJzerman AP
    Bioinformatics; 2008 Apr; 24(7):908-15. PubMed ID: 18304936
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits.
    Teeling H; Gloeckner FO
    BMC Bioinformatics; 2006 Feb; 7():66. PubMed ID: 16476165
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Phylogenomics Using Transcriptome Data.
    Cannon JT; Kocot KM
    Methods Mol Biol; 2016; 1452():65-80. PubMed ID: 27460370
    [TBL] [Abstract][Full Text] [Related]  

  • 10. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics.
    Brinkmann H; van der Giezen M; Zhou Y; Poncelin de Raucourt G; Philippe H
    Syst Biol; 2005 Oct; 54(5):743-57. PubMed ID: 16243762
    [TBL] [Abstract][Full Text] [Related]  

  • 12. TaxMan: a taxonomic database manager.
    Jones M; Blaxter M
    BMC Bioinformatics; 2006 Dec; 7():536. PubMed ID: 17176465
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes).
    Hosner PA; Faircloth BC; Glenn TC; Braun EL; Kimball RT
    Mol Biol Evol; 2016 Apr; 33(4):1110-25. PubMed ID: 26715628
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Using ESTs for phylogenomics: can one accurately infer a phylogenetic tree from a gappy alignment?
    Hartmann S; Vision TJ
    BMC Evol Biol; 2008 Mar; 8():95. PubMed ID: 18366758
    [TBL] [Abstract][Full Text] [Related]  

  • 15. POWER: PhylOgenetic WEb Repeater--an integrated and user-optimized framework for biomolecular phylogenetic analysis.
    Lin CY; Lin FK; Lin CH; Lai LW; Hsu HJ; Chen SH; Hsiung CA
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W553-6. PubMed ID: 15980533
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree.
    Gadagkar SR; Rosenberg MS; Kumar S
    J Exp Zool B Mol Dev Evol; 2005 Jan; 304(1):64-74. PubMed ID: 15593277
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Alternative methods for concatenation of core genes indicate a lack of resolution in deep nodes of the prokaryotic phylogeny.
    Bapteste E; Susko E; Leigh J; Ruiz-Trillo I; Bucknam J; Doolittle WF
    Mol Biol Evol; 2008 Jan; 25(1):83-91. PubMed ID: 17940208
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Aligning Protein-Coding Nucleotide Sequences with MACSE.
    Ranwez V; Chantret N; Delsuc F
    Methods Mol Biol; 2021; 2231():51-70. PubMed ID: 33289886
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular phylogenetic analysis of the Papionina using concatenation and species tree methods.
    Guevara EE; Steiper ME
    J Hum Evol; 2014 Jan; 66():18-28. PubMed ID: 24161610
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish.
    Ottová E; Simková A; Martin JF; de Bellocq JG; Gelnar M; Allienne JF; Morand S
    Fish Shellfish Immunol; 2005 Mar; 18(3):199-222. PubMed ID: 15519540
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.