105 related articles for article (PubMed ID: 17311347)
1. Mutagenesis data in the automated prediction of transmembrane helix dimers.
Metcalf DG; Law PB; DeGrado WF
Proteins; 2007 May; 67(2):375-84. PubMed ID: 17311347
[TBL] [Abstract][Full Text] [Related]
2. Specificity of helix packing in transmembrane dimer of the cell death factor BNIP3: a molecular modeling study.
Vereshaga YA; Volynsky PE; Pustovalova JE; Nolde DE; Arseniev AS; Efremov RG
Proteins; 2007 Nov; 69(2):309-25. PubMed ID: 17600828
[TBL] [Abstract][Full Text] [Related]
3. Helix-helix interactions in membrane proteins: coarse-grained simulations of glycophorin a helix dimerization.
Psachoulia E; Fowler PW; Bond PJ; Sansom MS
Biochemistry; 2008 Oct; 47(40):10503-12. PubMed ID: 18783247
[TBL] [Abstract][Full Text] [Related]
4. Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching.
Adams PD; Engelman DM; Brünger AT
Proteins; 1996 Nov; 26(3):257-61. PubMed ID: 8953647
[TBL] [Abstract][Full Text] [Related]
5. Systematic molecular dynamics searching in a lipid bilayer: application to the glycophorin A and oncogenic ErbB-2 transmembrane domains.
Beevers AJ; Kukol A
J Mol Graph Model; 2006 Oct; 25(2):226-33. PubMed ID: 16434222
[TBL] [Abstract][Full Text] [Related]
6. Energetics of the native and non-native states of the glycophorin transmembrane helix dimer.
Mottamal M; Zhang J; Lazaridis T
Proteins; 2006 Mar; 62(4):996-1009. PubMed ID: 16395713
[TBL] [Abstract][Full Text] [Related]
7. Insights into the recognition and association of transmembrane alpha-helices. The free energy of alpha-helix dimerization in glycophorin A.
Hénin J; Pohorille A; Chipot C
J Am Chem Soc; 2005 Jun; 127(23):8478-84. PubMed ID: 15941282
[TBL] [Abstract][Full Text] [Related]
8. Dimerization of glycophorin A transmembrane helices: mutagenesis and modeling.
Engelman DM; Adair BD; Brünger A; Flanagan JM; Hunt JF; Lemmon MA; Treutlein H; Zhang J
Soc Gen Physiol Ser; 1993; 48():11-21. PubMed ID: 8503039
[No Abstract] [Full Text] [Related]
9. Helix-helix packing in a membrane-like environment.
Mingarro I; Elofsson A; von Heijne G
J Mol Biol; 1997 Oct; 272(4):633-41. PubMed ID: 9325117
[TBL] [Abstract][Full Text] [Related]
10. Energetics and stability of transmembrane helix packing: a replica-exchange simulation with a knowledge-based membrane potential.
Chen Z; Xu Y
Proteins; 2006 Feb; 62(2):539-52. PubMed ID: 16299775
[TBL] [Abstract][Full Text] [Related]
11. Optimal potentials for predicting inter-helical packing in transmembrane proteins.
Dobbs H; Orlandini E; Bonaccini R; Seno F
Proteins; 2002 Nov; 49(3):342-9. PubMed ID: 12360524
[TBL] [Abstract][Full Text] [Related]
12. A systematic search method for the identification of tightly packed transmembrane parallel alpha-helices.
Akula N; Pattabiraman N
J Biomol Struct Dyn; 2005 Jun; 22(6):625-34. PubMed ID: 15842168
[TBL] [Abstract][Full Text] [Related]
13. The stability of transmembrane helix interactions measured in a biological membrane.
Finger C; Volkmer T; Prodöhl A; Otzen DE; Engelman DM; Schneider D
J Mol Biol; 2006 May; 358(5):1221-8. PubMed ID: 16574146
[TBL] [Abstract][Full Text] [Related]
14. Computational modeling of protein mutant stability: analysis and optimization of statistical potentials and structural features reveal insights into prediction model development.
Parthiban V; Gromiha MM; Abhinandan M; Schomburg D
BMC Struct Biol; 2007 Aug; 7():54. PubMed ID: 17705837
[TBL] [Abstract][Full Text] [Related]
15. Structure prediction of small transmembrane helix bundles.
Gottschalk KE
J Mol Graph Model; 2004 Sep; 23(1):99-110. PubMed ID: 15331058
[TBL] [Abstract][Full Text] [Related]
16. Influence of hydrophobic matching on association of model transmembrane fragments containing a minimised glycophorin A dimerisation motif.
Orzáez M; Lukovic D; Abad C; Pérez-Payá E; Mingarro I
FEBS Lett; 2005 Mar; 579(7):1633-8. PubMed ID: 15757653
[TBL] [Abstract][Full Text] [Related]
17. A potential smoothing algorithm accurately predicts transmembrane helix packing.
Pappu RV; Marshall GR; Ponder JW
Nat Struct Biol; 1999 Jan; 6(1):50-5. PubMed ID: 9886292
[TBL] [Abstract][Full Text] [Related]
18. A mutational study of transmembrane helix-helix interactions.
Prodöhl A; Weber M; Dreher C; Schneider D
Biochimie; 2007 Nov; 89(11):1433-7. PubMed ID: 17688996
[TBL] [Abstract][Full Text] [Related]
19. Contribution of energy values to the analysis of global searching molecular dynamics simulations of transmembrane helical bundles.
Torres J; Briggs JA; Arkin IT
Biophys J; 2002 Jun; 82(6):3063-71. PubMed ID: 12023229
[TBL] [Abstract][Full Text] [Related]
20. Aromatic and cation-pi interactions enhance helix-helix association in a membrane environment.
Johnson RM; Hecht K; Deber CM
Biochemistry; 2007 Aug; 46(32):9208-14. PubMed ID: 17658897
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
