These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

56 related articles for article (PubMed ID: 17314106)

  • 1. Design of MHC I stabilizing peptides by agent-based exploration of sequence space.
    Hiss JA; Bredenbeck A; Losch FO; Wrede P; Walden P; Schneider G
    Protein Eng Des Sel; 2007 Mar; 20(3):99-108. PubMed ID: 17314106
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Attractors in Sequence Space: Agent-Based Exploration of MHC I Binding Peptides.
    Jäger N; Wisniewska JM; Hiss JA; Freier A; Losch FO; Walden P; Wrede P; Schneider G
    Mol Inform; 2010 Jan; 29(1-2):65-74. PubMed ID: 27463849
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structural prediction of peptides bound to MHC class I.
    Fagerberg T; Cerottini JC; Michielin O
    J Mol Biol; 2006 Feb; 356(2):521-46. PubMed ID: 16368108
    [TBL] [Abstract][Full Text] [Related]  

  • 4. POPI: predicting immunogenicity of MHC class I binding peptides by mining informative physicochemical properties.
    Tung CW; Ho SY
    Bioinformatics; 2007 Apr; 23(8):942-9. PubMed ID: 17384427
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Peptide-binding motif prediction by using phage display library for SasaUBA*0301, a resistance haplotype of MHC class I molecule from Atlantic Salmon (Salmo salar).
    Zhao H; Hermsen T; Stet RJ; Skjødt K; Savelkoul HF
    Mol Immunol; 2008 Mar; 45(6):1658-64. PubMed ID: 18206244
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Predictive Bayesian neural network models of MHC class II peptide binding.
    Burden FR; Winkler DA
    J Mol Graph Model; 2005 Jun; 23(6):481-9. PubMed ID: 15878832
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Design of enhanced agonists through the use of a new virtual screening method: application to peptides that bind class I major histocompatibility complex (MHC) molecules.
    Madurga S; Belda I; Llorà X; Giralt E
    Protein Sci; 2005 Aug; 14(8):2069-79. PubMed ID: 16046628
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Non-canonical anchor motif peptides bound to MHC class I induce cellular responses.
    Lazoura E; Lodding J; Farrugia W; Day S; Ramsland PA; Apostolopoulos V
    Mol Immunol; 2009 Mar; 46(6):1171-8. PubMed ID: 19118903
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Structure-based prediction of MHC-peptide association: algorithm comparison and application to cancer vaccine design.
    Schiewe AJ; Haworth IS
    J Mol Graph Model; 2007 Oct; 26(3):667-75. PubMed ID: 17493854
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A motif detection and classification method for peptide sequences using genetic programming.
    Tomita Y; Kato R; Okochi M; Honda H
    J Biosci Bioeng; 2008 Aug; 106(2):154-61. PubMed ID: 18804058
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MHC I stabilizing potential of computer-designed octapeptides.
    Wisniewska JM; Jäger N; Freier A; Losch FO; Wiesmüller KH; Walden P; Wrede P; Schneider G; Hiss JA
    J Biomed Biotechnol; 2010; 2010():396847. PubMed ID: 20508831
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Prediction of MHC class II binders using the ant colony search strategy.
    Karpenko O; Shi J; Dai Y
    Artif Intell Med; 2005; 35(1-2):147-56. PubMed ID: 16061368
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prediction of peptide binding to major histocompatibility complex class II molecules through use of boosted fuzzy classifier with SWEEP operator method.
    Takahashi H; Honda H
    J Biosci Bioeng; 2006 Feb; 101(2):137-41. PubMed ID: 16569609
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Predicting the affinity of epitope-peptides with class I MHC molecule HLA-A*0201: an application of amino acid-based peptide prediction.
    Du QS; Wei YT; Pang ZW; Chou KC; Huang RB
    Protein Eng Des Sel; 2007 Sep; 20(9):417-23. PubMed ID: 17681974
    [TBL] [Abstract][Full Text] [Related]  

  • 15. H-2Kb-restricted CTL epitopes from mouse heparanase elicit an antitumor immune response in vivo.
    Tang XD; Wan Y; Chen L; Chen T; Yu ST; Xiong Z; Fang DC; Liang GP; Yang SM
    Cancer Res; 2008 Mar; 68(5):1529-37. PubMed ID: 18316618
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparison between computational alanine scanning and per-residue binding free energy decomposition for protein-protein association using MM-GBSA: application to the TCR-p-MHC complex.
    Zoete V; Michielin O
    Proteins; 2007 Jun; 67(4):1026-47. PubMed ID: 17377991
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Physics and chemistry-driven artificial neural network for predicting bioactivity of peptides and proteins and their design.
    Huang RB; Du QS; Wei YT; Pang ZW; Wei H; Chou KC
    J Theor Biol; 2009 Feb; 256(3):428-35. PubMed ID: 18835398
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Skipping a step with neural nets.
    Gulukota K
    Nat Biotechnol; 1998 Aug; 16(8):722-3. PubMed ID: 9702766
    [No Abstract]   [Full Text] [Related]  

  • 19. Characterization of domain-peptide interaction interface: a case study on the amphiphysin-1 SH3 domain.
    Hou T; Zhang W; Case DA; Wang W
    J Mol Biol; 2008 Feb; 376(4):1201-14. PubMed ID: 18206907
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Class I major histocompatibility complexes loaded by a periodate trigger.
    Rodenko B; Toebes M; Celie PH; Perrakis A; Schumacher TN; Ovaa H
    J Am Chem Soc; 2009 Sep; 131(34):12305-13. PubMed ID: 19655751
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.