316 related articles for article (PubMed ID: 17367143)
1. A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry.
Mortimer SA; Weeks KM
J Am Chem Soc; 2007 Apr; 129(14):4144-5. PubMed ID: 17367143
[No Abstract] [Full Text] [Related]
2. RNA SHAPE chemistry reveals nonhierarchical interactions dominate equilibrium structural transitions in tRNA(Asp) transcripts.
Wilkinson KA; Merino EJ; Weeks KM
J Am Chem Soc; 2005 Apr; 127(13):4659-67. PubMed ID: 15796531
[TBL] [Abstract][Full Text] [Related]
3. Selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution.
Wilkinson KA; Merino EJ; Weeks KM
Nat Protoc; 2006; 1(3):1610-6. PubMed ID: 17406453
[TBL] [Abstract][Full Text] [Related]
4. Time-resolved RNA SHAPE chemistry.
Mortimer SA; Weeks KM
J Am Chem Soc; 2008 Dec; 130(48):16178-80. PubMed ID: 18998638
[TBL] [Abstract][Full Text] [Related]
5. RNA SHAPE chemistry with aromatic acylating reagents.
Nodin L; Noël O; Chaminade F; Maskri O; Barbier V; David O; Fossé P; Xie J
Bioorg Med Chem Lett; 2015 Feb; 25(3):566-70. PubMed ID: 25557357
[TBL] [Abstract][Full Text] [Related]
6. Determination of RNA tertiary structure by electron paramagnetic resonance spectroscopy (EPR).
Piton N; Engels JW
Nucleosides Nucleotides Nucleic Acids; 2003; 22(5-8):1661-4. PubMed ID: 14565489
[No Abstract] [Full Text] [Related]
7. Neutral networks of sequence to shape maps.
Jin EY; Qin J; Reidys CM
J Theor Biol; 2008 Feb; 250(3):484-97. PubMed ID: 18045617
[TBL] [Abstract][Full Text] [Related]
8. SHAPE Selection (SHAPES) enrich for RNA structure signal in SHAPE sequencing-based probing data.
Poulsen LD; Kielpinski LJ; Salama SR; Krogh A; Vinther J
RNA; 2015 May; 21(5):1042-52. PubMed ID: 25805860
[TBL] [Abstract][Full Text] [Related]
9. RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE).
Merino EJ; Wilkinson KA; Coughlan JL; Weeks KM
J Am Chem Soc; 2005 Mar; 127(12):4223-31. PubMed ID: 15783204
[TBL] [Abstract][Full Text] [Related]
10. Diverse Reagent Scaffolds Provide Differential Selectivity of 2'-OH Acylation in RNA.
Xiao L; Fang L; Chatterjee S; Kool ET
J Am Chem Soc; 2023 Jan; 145(1):143-151. PubMed ID: 36542611
[TBL] [Abstract][Full Text] [Related]
11. General combinatorics of RNA secondary structure.
Liao B; Wang TM
Math Biosci; 2004 Sep; 191(1):69-81. PubMed ID: 15312744
[TBL] [Abstract][Full Text] [Related]
12. [Predicting RNA secondary structures including pseudoknots by covariance with stacking and minimum free energy].
Yang J; Luo Z; Fang X; Wang J; Tang K
Sheng Wu Gong Cheng Xue Bao; 2008 Apr; 24(4):659-64. PubMed ID: 18616179
[TBL] [Abstract][Full Text] [Related]
13. Dynamics and energetics of the base flipping conformation studied with base pair-mimic nucleosides.
Nakano S; Oka H; Uotani Y; Uenishi K; Fujii M; Sugimoto N
Biochemistry; 2009 Dec; 48(47):11304-11. PubMed ID: 19839646
[TBL] [Abstract][Full Text] [Related]
14. Topological classification of RNA structures.
Bon M; Vernizzi G; Orland H; Zee A
J Mol Biol; 2008 Jun; 379(4):900-11. PubMed ID: 18485361
[TBL] [Abstract][Full Text] [Related]
15. Prediction of RNA secondary structure using generalized centroid estimators.
Hamada M; Kiryu H; Sato K; Mituyama T; Asai K
Bioinformatics; 2009 Feb; 25(4):465-73. PubMed ID: 19095700
[TBL] [Abstract][Full Text] [Related]
16. Computational analysis of RNAs.
Eddy SR
Cold Spring Harb Symp Quant Biol; 2006; 71():117-28. PubMed ID: 17381287
[TBL] [Abstract][Full Text] [Related]
17. The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data.
Parisien M; Major F
Nature; 2008 Mar; 452(7183):51-5. PubMed ID: 18322526
[TBL] [Abstract][Full Text] [Related]
18. Triggering of RNA secondary structures by a functionalized nucleobase.
Höbartner C; Mittendorfer H; Breuker K; Micura R
Angew Chem Int Ed Engl; 2004 Jul; 43(30):3922-5. PubMed ID: 15274214
[No Abstract] [Full Text] [Related]
19. Time-resolved RNA SHAPE chemistry: quantitative RNA structure analysis in one-second snapshots and at single-nucleotide resolution.
Mortimer SA; Weeks KM
Nat Protoc; 2009; 4(10):1413-21. PubMed ID: 19745823
[TBL] [Abstract][Full Text] [Related]
20. Allosteric control of ribozyme catalysis by using DNA constraints.
Zelin E; Silverman SK
Chembiochem; 2007 Nov; 8(16):1907-11. PubMed ID: 17876755
[No Abstract] [Full Text] [Related]
[Next] [New Search]
