BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

382 related articles for article (PubMed ID: 17372197)

  • 1. The implications of alternative splicing in the ENCODE protein complement.
    Tress ML; Martelli PL; Frankish A; Reeves GA; Wesselink JJ; Yeats C; Olason PI; Albrecht M; Hegyi H; Giorgetti A; Raimondo D; Lagarde J; Laskowski RA; López G; Sadowski MI; Watson JD; Fariselli P; Rossi I; Nagy A; Kai W; Størling Z; Orsini M; Assenov Y; Blankenburg H; Huthmacher C; Ramírez F; Schlicker A; Denoeud F; Jones P; Kerrien S; Orchard S; Antonarakis SE; Reymond A; Birney E; Brunak S; Casadio R; Guigo R; Harrow J; Hermjakob H; Jones DT; Lengauer T; Orengo CA; Patthy L; Thornton JM; Tramontano A; Valencia A
    Proc Natl Acad Sci U S A; 2007 Mar; 104(13):5495-500. PubMed ID: 17372197
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structural genomics analysis of alternative splicing and application to isoform structure modeling.
    Wang P; Yan B; Guo JT; Hicks C; Xu Y
    Proc Natl Acad Sci U S A; 2005 Dec; 102(52):18920-5. PubMed ID: 16354838
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level.
    Abascal F; Ezkurdia I; Rodriguez-Rivas J; Rodriguez JM; del Pozo A; Vázquez J; Valencia A; Tress ML
    PLoS Comput Biol; 2015 Jun; 11(6):e1004325. PubMed ID: 26061177
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function.
    Ezkurdia I; del Pozo A; Frankish A; Rodriguez JM; Harrow J; Ashman K; Valencia A; Tress ML
    Mol Biol Evol; 2012 Sep; 29(9):2265-83. PubMed ID: 22446687
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Alternative splicing in human transcriptome: functional and structural influence on proteins.
    Yura K; Shionyu M; Hagino K; Hijikata A; Hirashima Y; Nakahara T; Eguchi T; Shinoda K; Yamaguchi A; Takahashi K; Itoh T; Imanishi T; Gojobori T; Go M
    Gene; 2006 Oct; 380(2):63-71. PubMed ID: 16872759
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
    Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
    BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Mechanisms and Regulation of Alternative Pre-mRNA Splicing.
    Lee Y; Rio DC
    Annu Rev Biochem; 2015; 84():291-323. PubMed ID: 25784052
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms.
    Romero PR; Zaidi S; Fang YY; Uversky VN; Radivojac P; Oldfield CJ; Cortese MS; Sickmeier M; LeGall T; Obradovic Z; Dunker AK
    Proc Natl Acad Sci U S A; 2006 May; 103(22):8390-5. PubMed ID: 16717195
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MAISTAS: a tool for automatic structural evaluation of alternative splicing products.
    Floris M; Raimondo D; Leoni G; Orsini M; Marcatili P; Tramontano A
    Bioinformatics; 2011 Jun; 27(12):1625-9. PubMed ID: 21498402
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Function of alternative splicing.
    Stamm S; Ben-Ari S; Rafalska I; Tang Y; Zhang Z; Toiber D; Thanaraj TA; Soreq H
    Gene; 2005 Jan; 344():1-20. PubMed ID: 15656968
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Role of tissue specific alternative pre-mRNA splicing in the differentiation of the erythrocyte membrane.
    Benz EJ; Huang SC
    Trans Am Clin Climatol Assoc; 1997; 108():78-95. PubMed ID: 9108669
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structural implication of splicing stochastics.
    Melamud E; Moult J
    Nucleic Acids Res; 2009 Aug; 37(14):4862-72. PubMed ID: 19528068
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Alternative splicing produces structural and functional changes in CUGBP2.
    Suzuki H; Takeuchi M; Sugiyama A; Alam AK; Vu LT; Sekiyama Y; Dam HC; Ohki SY; Tsukahara T
    BMC Biochem; 2012 Mar; 13():6. PubMed ID: 22433174
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Cancer-Associated Perturbations in Alternative Pre-messenger RNA Splicing.
    Shkreta L; Bell B; Revil T; Venables JP; Prinos P; Elela SA; Chabot B
    Cancer Treat Res; 2013; 158():41-94. PubMed ID: 24222354
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Regulation of apoptosis by alternative pre-mRNA splicing.
    Schwerk C; Schulze-Osthoff K
    Mol Cell; 2005 Jul; 19(1):1-13. PubMed ID: 15989960
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
    Imanishi T; Itoh T; Suzuki Y; O'Donovan C; Fukuchi S; Koyanagi KO; Barrero RA; Tamura T; Yamaguchi-Kabata Y; Tanino M; Yura K; Miyazaki S; Ikeo K; Homma K; Kasprzyk A; Nishikawa T; Hirakawa M; Thierry-Mieg J; Thierry-Mieg D; Ashurst J; Jia L; Nakao M; Thomas MA; Mulder N; Karavidopoulou Y; Jin L; Kim S; Yasuda T; Lenhard B; Eveno E; Suzuki Y; Yamasaki C; Takeda J; Gough C; Hilton P; Fujii Y; Sakai H; Tanaka S; Amid C; Bellgard M; Bonaldo Mde F; Bono H; Bromberg SK; Brookes AJ; Bruford E; Carninci P; Chelala C; Couillault C; de Souza SJ; Debily MA; Devignes MD; Dubchak I; Endo T; Estreicher A; Eyras E; Fukami-Kobayashi K; Gopinath GR; Graudens E; Hahn Y; Han M; Han ZG; Hanada K; Hanaoka H; Harada E; Hashimoto K; Hinz U; Hirai M; Hishiki T; Hopkinson I; Imbeaud S; Inoko H; Kanapin A; Kaneko Y; Kasukawa T; Kelso J; Kersey P; Kikuno R; Kimura K; Korn B; Kuryshev V; Makalowska I; Makino T; Mano S; Mariage-Samson R; Mashima J; Matsuda H; Mewes HW; Minoshima S; Nagai K; Nagasaki H; Nagata N; Nigam R; Ogasawara O; Ohara O; Ohtsubo M; Okada N; Okido T; Oota S; Ota M; Ota T; Otsuki T; Piatier-Tonneau D; Poustka A; Ren SX; Saitou N; Sakai K; Sakamoto S; Sakate R; Schupp I; Servant F; Sherry S; Shiba R; Shimizu N; Shimoyama M; Simpson AJ; Soares B; Steward C; Suwa M; Suzuki M; Takahashi A; Tamiya G; Tanaka H; Taylor T; Terwilliger JD; Unneberg P; Veeramachaneni V; Watanabe S; Wilming L; Yasuda N; Yoo HS; Stodolsky M; Makalowski W; Go M; Nakai K; Takagi T; Kanehisa M; Sakaki Y; Quackenbush J; Okazaki Y; Hayashizaki Y; Hide W; Chakraborty R; Nishikawa K; Sugawara H; Tateno Y; Chen Z; Oishi M; Tonellato P; Apweiler R; Okubo K; Wagner L; Wiemann S; Strausberg RL; Isogai T; Auffray C; Nomura N; Gojobori T; Sugano S
    PLoS Biol; 2004 Jun; 2(6):e162. PubMed ID: 15103394
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.
    Johnson JM; Castle J; Garrett-Engele P; Kan Z; Loerch PM; Armour CD; Santos R; Schadt EE; Stoughton R; Shoemaker DD
    Science; 2003 Dec; 302(5653):2141-4. PubMed ID: 14684825
    [TBL] [Abstract][Full Text] [Related]  

  • 18. K+ channel subunit isoforms with divergent carboxy-terminal sequences carry distinct membrane targeting signals.
    Ponce A; Vega-Saenz de Miera E; Kentros C; Moreno H; Thornhill B; Rudy B
    J Membr Biol; 1997 Sep; 159(2):149-59. PubMed ID: 9307441
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity.
    Milanesi L; Petrillo M; Sepe L; Boccia A; D'Agostino N; Passamano M; Di Nardo S; Tasco G; Casadio R; Paolella G
    BMC Bioinformatics; 2005 Dec; 6 Suppl 4(Suppl 4):S20. PubMed ID: 16351747
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Alternatively spliced human genes by exon skipping--a database (ASHESdb).
    Sakharkar MK; Perumal BS; Lim YP; Chern LP; Yu Y; Kangueane P
    In Silico Biol; 2005; 5(3):221-5. PubMed ID: 15984933
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.