These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

121 related articles for article (PubMed ID: 17394029)

  • 1. Sequence analysis and rule development of predicting protein stability change upon mutation using decision tree model.
    Huang LT; Gromiha MM; Ho SY
    J Mol Model; 2007 Aug; 13(8):879-90. PubMed ID: 17394029
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Knowledge acquisition and development of accurate rules for predicting protein stability changes.
    Huang LT; Gromiha MM; Hwang SF; Ho SY
    Comput Biol Chem; 2006 Dec; 30(6):408-15. PubMed ID: 17000135
    [TBL] [Abstract][Full Text] [Related]  

  • 3. iPTREE-STAB: interpretable decision tree based method for predicting protein stability changes upon mutations.
    Huang LT; Gromiha MM; Ho SY
    Bioinformatics; 2007 May; 23(10):1292-3. PubMed ID: 17379687
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Prediction of protein stability upon point mutations.
    Gromiha MM
    Biochem Soc Trans; 2007 Dec; 35(Pt 6):1569-73. PubMed ID: 18031268
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A neural-network-based method for predicting protein stability changes upon single point mutations.
    Capriotti E; Fariselli P; Casadio R
    Bioinformatics; 2004 Aug; 20 Suppl 1():i63-8. PubMed ID: 15262782
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Reliable prediction of protein thermostability change upon double mutation from amino acid sequence.
    Huang LT; Gromiha MM
    Bioinformatics; 2009 Sep; 25(17):2181-7. PubMed ID: 19535532
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Thermodynamic database for proteins: features and applications.
    Gromiha MM; Sarai A
    Methods Mol Biol; 2010; 609():97-112. PubMed ID: 20221915
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Computational modeling of protein mutant stability: analysis and optimization of statistical potentials and structural features reveal insights into prediction model development.
    Parthiban V; Gromiha MM; Abhinandan M; Schomburg D
    BMC Struct Biol; 2007 Aug; 7():54. PubMed ID: 17705837
    [TBL] [Abstract][Full Text] [Related]  

  • 9. I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure.
    Capriotti E; Fariselli P; Casadio R
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W306-10. PubMed ID: 15980478
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of protein mutant stability using classification and regression tool.
    Huang LT; Saraboji K; Ho SY; Hwang SF; Ponnuswamy MN; Gromiha MM
    Biophys Chem; 2007 Feb; 125(2-3):462-70. PubMed ID: 17113702
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Importance of mutant position in Ramachandran plot for predicting protein stability of surface mutations.
    Gromiha MM; Oobatake M; Kono H; Uedaira H; Sarai A
    Biopolymers; 2002 Aug; 64(4):210-20. PubMed ID: 12115138
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SAAFEC: Predicting the Effect of Single Point Mutations on Protein Folding Free Energy Using a Knowledge-Modified MM/PBSA Approach.
    Getov I; Petukh M; Alexov E
    Int J Mol Sci; 2016 Apr; 17(4):512. PubMed ID: 27070572
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Robust prediction of mutation-induced protein stability change by property encoding of amino acids.
    Kang S; Chen G; Xiao G
    Protein Eng Des Sel; 2009 Feb; 22(2):75-83. PubMed ID: 19054789
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Importance of surrounding residues for protein stability of partially buried mutations.
    Gromiha MM; Oobatake M; Kono H; Uedaira H; Sarai A
    J Biomol Struct Dyn; 2000 Oct; 18(2):281-95. PubMed ID: 11089649
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.
    Godoy-Ruiz R; Ariza F; Rodriguez-Larrea D; Perez-Jimenez R; Ibarra-Molero B; Sanchez-Ruiz JM
    J Mol Biol; 2006 Oct; 362(5):966-78. PubMed ID: 16935299
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Stability effects of mutations and protein evolvability.
    Tokuriki N; Tawfik DS
    Curr Opin Struct Biol; 2009 Oct; 19(5):596-604. PubMed ID: 19765975
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Large-scale prediction of protein geometry and stability changes for arbitrary single point mutations.
    Bordner AJ; Abagyan RA
    Proteins; 2004 Nov; 57(2):400-13. PubMed ID: 15340927
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting the Effect of Single and Multiple Mutations on Protein Structural Stability.
    Dehghanpoor R; Ricks E; Hursh K; Gunderson S; Farhoodi R; Haspel N; Hutchinson B; Jagodzinski F
    Molecules; 2018 Jan; 23(2):. PubMed ID: 29382060
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting protein stability changes from sequences using support vector machines.
    Capriotti E; Fariselli P; Calabrese R; Casadio R
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii54-8. PubMed ID: 16204125
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Predicting disordered regions in proteins based on decision trees of reduced amino acid composition.
    Han P; Zhang X; Norton RS; Feng ZP
    J Comput Biol; 2006 Dec; 13(10):1723-34. PubMed ID: 17238841
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.