BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

214 related articles for article (PubMed ID: 17397211)

  • 1. Preparative peptide isoelectric focusing as a tool for improving the identification of lysine-acetylated peptides from complex mixtures.
    Xie H; Bandhakavi S; Roe MR; Griffin TJ
    J Proteome Res; 2007 May; 6(5):2019-26. PubMed ID: 17397211
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Evaluating preparative isoelectric focusing of complex peptide mixtures for tandem mass spectrometry-based proteomics: a case study in profiling chromatin-enriched subcellular fractions in Saccharomyces cerevisiae.
    Xie H; Bandhakavi S; Griffin TJ
    Anal Chem; 2005 May; 77(10):3198-207. PubMed ID: 15889909
    [TBL] [Abstract][Full Text] [Related]  

  • 3. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bioinformatics analysis of a Saccharomyces cerevisiae N-terminal proteome provides evidence of alternative translation initiation and post-translational N-terminal acetylation.
    Helsens K; Van Damme P; Degroeve S; Martens L; Arnesen T; Vandekerckhove J; Gevaert K
    J Proteome Res; 2011 Aug; 10(8):3578-89. PubMed ID: 21619078
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An alternative to tandem mass spectrometry: isoelectric point and accurate mass for the identification of peptides.
    Cargile BJ; Stephenson JL
    Anal Chem; 2004 Jan; 76(2):267-75. PubMed ID: 14719870
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Post-translational modifications of Desulfovibrio vulgaris Hildenborough sulfate reduction pathway proteins.
    Gaucher SP; Redding AM; Mukhopadhyay A; Keasling JD; Singh AK
    J Proteome Res; 2008 Jun; 7(6):2320-31. PubMed ID: 18416566
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Strategy for comprehensive identification of post-translational modifications in cellular proteins, including low abundant modifications: application to glyceraldehyde-3-phosphate dehydrogenase.
    Seo J; Jeong J; Kim YM; Hwang N; Paek E; Lee KJ
    J Proteome Res; 2008 Feb; 7(2):587-602. PubMed ID: 18183946
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Global histone analysis by mass spectrometry reveals a high content of acetylated lysine residues in the malaria parasite Plasmodium falciparum.
    Trelle MB; Salcedo-Amaya AM; Cohen AM; Stunnenberg HG; Jensen ON
    J Proteome Res; 2009 Jul; 8(7):3439-50. PubMed ID: 19351122
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comprehensive profiling of histone modifications using a label-free approach and its applications in determining structure-function relationships.
    Drogaris P; Wurtele H; Masumoto H; Verreault A; Thibault P
    Anal Chem; 2008 Sep; 80(17):6698-707. PubMed ID: 18671409
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures.
    Li GZ; Vissers JP; Silva JC; Golick D; Gorenstein MV; Geromanos SJ
    Proteomics; 2009 Mar; 9(6):1696-719. PubMed ID: 19294629
    [TBL] [Abstract][Full Text] [Related]  

  • 11. In-gel isoelectric focusing of peptides as a tool for improved protein identification.
    Krijgsveld J; Gauci S; Dormeyer W; Heck AJ
    J Proteome Res; 2006 Jul; 5(7):1721-30. PubMed ID: 16823980
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A versatile peptide pI calculator for phosphorylated and N-terminal acetylated peptides experimentally tested using peptide isoelectric focusing.
    Gauci S; van Breukelen B; Lemeer SM; Krijgsveld J; Heck AJ
    Proteomics; 2008 Dec; 8(23-24):4898-906. PubMed ID: 19003858
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An accurate and efficient algorithm for Peptide and ptm identification by tandem mass spectrometry.
    Ning K; Ng HK; Leong HW
    Genome Inform; 2007; 19():119-30. PubMed ID: 18546510
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Unbiased detection of posttranslational modifications using mass spectrometry.
    Savitski MF; Savitski MM
    Methods Mol Biol; 2010; 673():203-10. PubMed ID: 20835800
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Systematic assessment of the benefits and caveats in mining microbial post-translational modifications from shotgun proteomic data: the response of Shewanella oneidensis to chromate exposure.
    Thompson MR; Thompson DK; Hettich RL
    J Proteome Res; 2008 Feb; 7(2):648-58. PubMed ID: 18171020
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Identification and quantification of protein carbonylation using light and heavy isotope labeled Girard's P reagent.
    Mirzaei H; Regnier F
    J Chromatogr A; 2006 Nov; 1134(1-2):122-33. PubMed ID: 16996067
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Virtual polymorphism: finding divergent peptide matches in mass spectrometry data.
    Starkweather R; Barnes CS; Wyckoff GJ; Keightley JA
    Anal Chem; 2007 Jul; 79(13):5030-9. PubMed ID: 17521167
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Partial acetylation of lysine residues improves intraprotein cross-linking.
    Guo X; Bandyopadhyay P; Schilling B; Young MM; Fujii N; Aynechi T; Guy RK; Kuntz ID; Gibson BW
    Anal Chem; 2008 Feb; 80(4):951-60. PubMed ID: 18201069
    [TBL] [Abstract][Full Text] [Related]  

  • 19. InsPecT: identification of posttranslationally modified peptides from tandem mass spectra.
    Tanner S; Shu H; Frank A; Wang LC; Zandi E; Mumby M; Pevzner PA; Bafna V
    Anal Chem; 2005 Jul; 77(14):4626-39. PubMed ID: 16013882
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Serotype classification and characterisation of the rotavirus SA11 VP6 protein using mass spectrometry and two-dimensional gel electrophoresis.
    Emslie KR; Molloy MP; Barardi CR; Jardine D; Wilkins MR; Bellamy AR; Williams KL
    Funct Integr Genomics; 2000 May; 1(1):12-24. PubMed ID: 11793218
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.