231 related articles for article (PubMed ID: 17425312)
1. Induced fit conformational changes of a "reversed amidine" heterocycle: optimized interactions in a DNA minor groove complex.
Munde M; Lee M; Neidle S; Arafa R; Boykin DW; Liu Y; Bailly C; Wilson WD
J Am Chem Soc; 2007 May; 129(17):5688-98. PubMed ID: 17425312
[TBL] [Abstract][Full Text] [Related]
2. Out-of-shape DNA minor groove binders: induced fit interactions of heterocyclic dications with the DNA minor groove.
Miao Y; Lee MP; Parkinson GN; Batista-Parra A; Ismail MA; Neidle S; Boykin DW; Wilson WD
Biochemistry; 2005 Nov; 44(45):14701-8. PubMed ID: 16274217
[TBL] [Abstract][Full Text] [Related]
3. A thermodynamic and structural analysis of DNA minor-groove complex formation.
Mazur S; Tanious FA; Ding D; Kumar A; Boykin DW; Simpson IJ; Neidle S; Wilson WD
J Mol Biol; 2000 Jul; 300(2):321-37. PubMed ID: 10873468
[TBL] [Abstract][Full Text] [Related]
4. Evaluation of the influence of compound structure on stacked-dimer formation in the DNA minor groove.
Wang L; Carrasco C; Kumar A; Stephens CE; Bailly C; Boykin DW; Wilson WD
Biochemistry; 2001 Feb; 40(8):2511-21. PubMed ID: 11327873
[TBL] [Abstract][Full Text] [Related]
5. Design of DNA minor groove binding diamidines that recognize GC base pair sequences: a dimeric-hinge interaction motif.
Munde M; Ismail MA; Arafa R; Peixoto P; Collar CJ; Liu Y; Hu L; David-Cordonnier MH; Lansiaux A; Bailly C; Boykin DW; Wilson WD
J Am Chem Soc; 2007 Nov; 129(44):13732-43. PubMed ID: 17935330
[TBL] [Abstract][Full Text] [Related]
6. DNA sequence dependent monomer-dimer binding modulation of asymmetric benzimidazole derivatives.
Tanious FA; Hamelberg D; Bailly C; Czarny A; Boykin DW; Wilson WD
J Am Chem Soc; 2004 Jan; 126(1):143-53. PubMed ID: 14709078
[TBL] [Abstract][Full Text] [Related]
7. Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length.
Liu Y; Collar CJ; Kumar A; Stephens CE; Boykin DW; Wilson WD
J Phys Chem B; 2008 Sep; 112(37):11809-18. PubMed ID: 18717551
[TBL] [Abstract][Full Text] [Related]
8. Influence of compound structure on affinity, sequence selectivity, and mode of binding to DNA for unfused aromatic dications related to furamidine.
Nguyen B; Tardy C; Bailly C; Colson P; Houssier C; Kumar A; Boykin DW; Wilson WD
Biopolymers; 2002 Apr; 63(5):281-97. PubMed ID: 11877739
[TBL] [Abstract][Full Text] [Related]
9. Thiophene-based diamidine forms a "super" at binding minor groove agent.
Mallena S; Lee MP; Bailly C; Neidle S; Kumar A; Boykin DW; Wilson WD
J Am Chem Soc; 2004 Oct; 126(42):13659-69. PubMed ID: 15493923
[TBL] [Abstract][Full Text] [Related]
10. Unusually strong binding to the DNA minor groove by a highly twisted benzimidazole diphenylether: induced fit and bound water.
Tanious FA; Laine W; Peixoto P; Bailly C; Goodwin KD; Lewis MA; Long EC; Georgiadis MM; Tidwell RR; Wilson WD
Biochemistry; 2007 Jun; 46(23):6944-56. PubMed ID: 17506529
[TBL] [Abstract][Full Text] [Related]
11. Water-mediated binding of agents that target the DNA minor groove.
Liu Y; Kumar A; Depauw S; Nhili R; David-Cordonnier MH; Lee MP; Ismail MA; Farahat AA; Say M; Chackal-Catoen S; Batista-Parra A; Neidle S; Boykin DW; Wilson WD
J Am Chem Soc; 2011 Jul; 133(26):10171-83. PubMed ID: 21627167
[TBL] [Abstract][Full Text] [Related]
12. DNA minor groove induced dimerization of heterocyclic cations: compound structure, binding affinity, and specificity for a TTAA site.
Munde M; Kumar A; Nhili R; Depauw S; David-Cordonnier MH; Ismail MA; Stephens CE; Farahat AA; Batista-Parra A; Boykin DW; Wilson WD
J Mol Biol; 2010 Oct; 402(5):847-64. PubMed ID: 20713062
[TBL] [Abstract][Full Text] [Related]
13. Targeting the inverted CCAAT box 2 in the topoisomerase IIalpha promoter by JH-37, an imidazole-pyrrole polyamide hairpin: design, synthesis, molecular biology, and biophysical studies.
Henry JA; Le NM; Nguyen B; Howard CM; Bailey SL; Horick SM; Buchmueller KL; Kotecha M; Hochhauser D; Hartley JA; Wilson WD; Lee M
Biochemistry; 2004 Sep; 43(38):12249-57. PubMed ID: 15379563
[TBL] [Abstract][Full Text] [Related]
14. Structure-dependent binding of arylimidamides to the DNA minor groove.
Chai Y; Munde M; Kumar A; Mickelson L; Lin S; Campbell NH; Banerjee M; Akay S; Liu Z; Farahat AA; Nhili R; Depauw S; David-Cordonnier MH; Neidle S; Wilson WD; Boykin DW
Chembiochem; 2014 Jan; 15(1):68-79. PubMed ID: 24323836
[TBL] [Abstract][Full Text] [Related]
15. Effects of compound structure on carbazole dication-DNA complexes: tests of the minor-groove complex models.
Tanious FA; Ding D; Patrick DA; Bailly C; Tidwell RR; Wilson WD
Biochemistry; 2000 Oct; 39(39):12091-101. PubMed ID: 11009625
[TBL] [Abstract][Full Text] [Related]
16. Sequence recognition in the minor groove of DNA by covalently linked formamido imidazole-pyrrole-imidazole polyamides: effect of H-pin linkage and linker length on selectivity and affinity.
O'Hare CC; Uthe P; Mackay H; Blackmon K; Jones J; Brown T; Nguyen B; Wilson WD; Lee M; Hartley JA
Biochemistry; 2007 Oct; 46(42):11661-70. PubMed ID: 17910471
[TBL] [Abstract][Full Text] [Related]
17. Binding-linked protonation of a DNA minor-groove agent.
Nguyen B; Stanek J; Wilson WD
Biophys J; 2006 Feb; 90(4):1319-28. PubMed ID: 16299076
[TBL] [Abstract][Full Text] [Related]
18. Targeting the minor groove of DNA: crystal structures of two complexes between furan derivatives of berenil and the DNA dodecamer d(CGCGAATTCGCG)2.
Trent JO; Clark GR; Kumar A; Wilson WD; Boykin DW; Hall JE; Tidwell RR; Blagburn BL; Neidle S
J Med Chem; 1996 Nov; 39(23):4554-62. PubMed ID: 8917643
[TBL] [Abstract][Full Text] [Related]
19. Hx, a novel fluorescent, minor groove and sequence specific recognition element: design, synthesis, and DNA binding properties of p-anisylbenzimidazole-imidazole/pyrrole-containing polyamides.
Chavda S; Liu Y; Babu B; Davis R; Sielaff A; Ruprich J; Westrate L; Tronrud C; Ferguson A; Franks A; Tzou S; Adkins C; Rice T; Mackay H; Kluza J; Tahir SA; Lin S; Kiakos K; Bruce CD; Wilson WD; Hartley JA; Lee M
Biochemistry; 2011 Apr; 50(15):3127-36. PubMed ID: 21388229
[TBL] [Abstract][Full Text] [Related]
20. The unusual monomer recognition of guanine-containing mixed sequence DNA by a dithiophene heterocyclic diamidine.
Munde M; Kumar A; Peixoto P; Depauw S; Ismail MA; Farahat AA; Paul A; Say MV; David-Cordonnier MH; Boykin DW; Wilson WD
Biochemistry; 2014 Feb; 53(7):1218-27. PubMed ID: 24495039
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
