243 related articles for article (PubMed ID: 17459964)
1. CTX-BLAST: context sensitive version of protein BLAST.
Gambin A; Wojtalewicz P
Bioinformatics; 2007 Jul; 23(13):1686-8. PubMed ID: 17459964
[TBL] [Abstract][Full Text] [Related]
2. NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results.
Lagnel J; Tsigenopoulos CS; Iliopoulos I
Bioinformatics; 2009 Mar; 25(6):824-6. PubMed ID: 19181685
[TBL] [Abstract][Full Text] [Related]
3. Con-Struct Map: a comparative contact map analysis tool.
Chung JL; Beaver JE; Scheeff ED; Bourne PE
Bioinformatics; 2007 Sep; 23(18):2491-2. PubMed ID: 17709340
[TBL] [Abstract][Full Text] [Related]
4. QSCOP-BLAST--fast retrieval of quantified structural information for protein sequences of unknown structure.
Suhrer SJ; Gruber M; Sippl MJ
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W411-5. PubMed ID: 17478501
[TBL] [Abstract][Full Text] [Related]
5. MAGOS: multiple alignment and modelling server.
Garnier N; Friedrich A; Bolze R; Bettler E; Moulinier L; Geourjon C; Thompson JD; Deléage G; Poch O
Bioinformatics; 2006 Sep; 22(17):2164-5. PubMed ID: 16820425
[TBL] [Abstract][Full Text] [Related]
6. Comparison study on k-word statistical measures for protein: from sequence to 'sequence space'.
Dai Q; Wang T
BMC Bioinformatics; 2008 Sep; 9():394. PubMed ID: 18811946
[TBL] [Abstract][Full Text] [Related]
7. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
Pei J; Cai W; Kinch LN; Grishin NV
Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
[TBL] [Abstract][Full Text] [Related]
8. Prediction of unfolded segments in a protein sequence based on amino acid composition.
Coeytaux K; Poupon A
Bioinformatics; 2005 May; 21(9):1891-900. PubMed ID: 15657106
[TBL] [Abstract][Full Text] [Related]
9. APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
Armougom F; Poirot O; Moretti S; Higgins DG; Bucher P; Keduas V; Notredame C
Bioinformatics; 2006 Oct; 22(19):2439-40. PubMed ID: 17032685
[TBL] [Abstract][Full Text] [Related]
10. DFprot: a webtool for predicting local chain deformability.
Garzón JI; Kovacs J; Abagyan R; Chacón P
Bioinformatics; 2007 Apr; 23(7):901-2. PubMed ID: 17277334
[TBL] [Abstract][Full Text] [Related]
11. PSIBLAST_PairwiseStatSig: reordering PSI-BLAST hits using pairwise statistical significance.
Agrawal A; Huang X
Bioinformatics; 2009 Apr; 25(8):1082-3. PubMed ID: 19251771
[TBL] [Abstract][Full Text] [Related]
12. VISTAL--a new 2D visualization tool of protein 3D structural alignments.
Kolodny R; Honig B
Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525
[TBL] [Abstract][Full Text] [Related]
13. On distance and similarity in fold space.
Sippl MJ
Bioinformatics; 2008 Mar; 24(6):872-3. PubMed ID: 18227113
[TBL] [Abstract][Full Text] [Related]
14. Efficient functional clustering of protein sequences using the Dirichlet process.
Brown DP
Bioinformatics; 2008 Aug; 24(16):1765-71. PubMed ID: 18511467
[TBL] [Abstract][Full Text] [Related]
15. Application of a simple likelihood ratio approximant to protein sequence classification.
Kaján L; Kertész-Farkas A; Franklin D; Ivanova N; Kocsor A; Pongor S
Bioinformatics; 2006 Dec; 22(23):2865-9. PubMed ID: 17090576
[TBL] [Abstract][Full Text] [Related]
16. ProBias: a web-server for the identification of user-specified types of compositionally biased segments in protein sequences.
Kuznetsov IB
Bioinformatics; 2008 Jul; 24(13):1534-5. PubMed ID: 18480099
[TBL] [Abstract][Full Text] [Related]
17. FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded.
Prilusky J; Felder CE; Zeev-Ben-Mordehai T; Rydberg EH; Man O; Beckmann JS; Silman I; Sussman JL
Bioinformatics; 2005 Aug; 21(16):3435-8. PubMed ID: 15955783
[TBL] [Abstract][Full Text] [Related]
18. Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities.
Smith RE; Lovell SC; Burke DF; Montalvao RW; Blundell TL
Bioinformatics; 2007 May; 23(9):1099-105. PubMed ID: 17341496
[TBL] [Abstract][Full Text] [Related]
19. HCPM--program for hierarchical clustering of protein models.
Gront D; Kolinski A
Bioinformatics; 2005 Jul; 21(14):3179-80. PubMed ID: 15840705
[TBL] [Abstract][Full Text] [Related]
20. PROMALS: towards accurate multiple sequence alignments of distantly related proteins.
Pei J; Grishin NV
Bioinformatics; 2007 Apr; 23(7):802-8. PubMed ID: 17267437
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]