These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

137 related articles for article (PubMed ID: 17508774)

  • 1. Molecular dynamics study of intrinsic stability in six RNA terminal loop motifs.
    Nyström B; Nilsson L
    J Biomol Struct Dyn; 2007 Jun; 24(6):525-36. PubMed ID: 17508774
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
    Vecenie CJ; Morrow CV; Zyra A; Serra MJ
    Biochemistry; 2006 Feb; 45(5):1400-7. PubMed ID: 16445282
    [TBL] [Abstract][Full Text] [Related]  

  • 3. All-atom Monte Carlo simulation of GCAA RNA folding.
    Nivón LG; Shakhnovich EI
    J Mol Biol; 2004 Nov; 344(1):29-45. PubMed ID: 15504400
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop.
    Li W; Ma B; Shapiro B
    J Biomol Struct Dyn; 2001 Dec; 19(3):381-96. PubMed ID: 11790138
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structural dynamics of the box C/D RNA kink-turn and its complex with proteins: the role of the A-minor 0 interaction, long-residency water bridges, and structural ion-binding sites revealed by molecular simulations.
    Spacková N; Réblová K; Sponer J
    J Phys Chem B; 2010 Aug; 114(32):10581-93. PubMed ID: 20701388
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop.
    Sorin EJ; Engelhardt MA; Herschlag D; Pande VS
    J Mol Biol; 2002 Apr; 317(4):493-506. PubMed ID: 11955005
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics simulation of the structure, dynamics, and thermostability of the RNA hairpins uCACGg and cUUCGg.
    Villa A; Widjajakusuma E; Stock G
    J Phys Chem B; 2008 Jan; 112(1):134-42. PubMed ID: 18069816
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Theoretical studies of an exceptionally stable RNA tetraloop: observation of convergence from an incorrect NMR structure to the correct one using unrestrained molecular dynamics.
    Miller JL; Kollman PA
    J Mol Biol; 1997 Jul; 270(3):436-50. PubMed ID: 9237909
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Stability of RNA hairpins closed by wobble base pairs.
    Giese MR; Betschart K; Dale T; Riley CK; Rowan C; Sprouse KJ; Serra MJ
    Biochemistry; 1998 Jan; 37(4):1094-100. PubMed ID: 9454601
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Dynamics and stability of GCAA tetraloops with 2-aminopurine and purine substitutions.
    Sarzynska J; Kulinski T
    J Biomol Struct Dyn; 2005 Feb; 22(4):425-39. PubMed ID: 15588106
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structures of non-canonical tandem base pairs in RNA helices: review.
    Heus HA; Hilbers CW
    Nucleosides Nucleotides Nucleic Acids; 2003; 22(5-8):559-71. PubMed ID: 14565230
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Aminoglycoside binding in the major groove of duplex RNA: the thermodynamic and electrostatic forces that govern recognition.
    Jin E; Katritch V; Olson WK; Kharatisvili M; Abagyan R; Pilch DS
    J Mol Biol; 2000 Apr; 298(1):95-110. PubMed ID: 10756107
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A novel RNA motif based on the structure of unusually stable 2',5'-linked r(UUCG) loops.
    Denisov AY; Hannoush RN; Gehring K; Damha MJ
    J Am Chem Soc; 2003 Sep; 125(38):11525-31. PubMed ID: 13129354
    [TBL] [Abstract][Full Text] [Related]  

  • 14. NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.
    Amarasinghe GK; De Guzman RN; Turner RB; Summers MF
    J Mol Biol; 2000 May; 299(1):145-56. PubMed ID: 10860728
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA structure and dynamics: a base pairing perspective.
    Halder S; Bhattacharyya D
    Prog Biophys Mol Biol; 2013 Nov; 113(2):264-83. PubMed ID: 23891726
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The 5' stem-loop from human U4 snRNA adopts a novel conformation stabilized by G-C and G-U base pairs.
    Sahasrabudhe PV; Sun J; Gmeiner WH
    J Biomol Struct Dyn; 1997 Apr; 14(5):567-77. PubMed ID: 9130079
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA.
    Fountain MA; Serra MJ; Krugh TR; Turner DH
    Biochemistry; 1996 May; 35(21):6539-48. PubMed ID: 8639602
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solution structure of an RNA internal loop with three consecutive sheared GA pairs.
    Chen G; Znosko BM; Kennedy SD; Krugh TR; Turner DH
    Biochemistry; 2005 Mar; 44(8):2845-56. PubMed ID: 15723528
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks.
    Butcher SE; Pyle AM
    Acc Chem Res; 2011 Dec; 44(12):1302-11. PubMed ID: 21899297
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
    Chen X; McDowell JA; Kierzek R; Krugh TR; Turner DH
    Biochemistry; 2000 Aug; 39(30):8970-82. PubMed ID: 10913310
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.