272 related articles for article (PubMed ID: 17517762)
1. INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events.
Chen FC; Chen CJ; Chuang TJ
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W633-8. PubMed ID: 17517762
[TBL] [Abstract][Full Text] [Related]
2. Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes.
Tian D; Wang Q; Zhang P; Araki H; Yang S; Kreitman M; Nagylaki T; Hudson R; Bergelson J; Chen JQ
Nature; 2008 Sep; 455(7209):105-8. PubMed ID: 18641631
[TBL] [Abstract][Full Text] [Related]
3. Evolution of a noncoding region of the chloroplast genome.
Golenberg EM; Clegg MT; Durbin ML; Doebley J; Ma DP
Mol Phylogenet Evol; 1993 Mar; 2(1):52-64. PubMed ID: 8081547
[TBL] [Abstract][Full Text] [Related]
4. DigiPINS: a database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies.
Navratil V; Penel S; Delmotte S; Mouchiroud D; Gautier C; Aouacheria A
Biochimie; 2008 Apr; 90(4):563-9. PubMed ID: 17988782
[TBL] [Abstract][Full Text] [Related]
5. Identification of nine human-specific frameshift mutations by comparative analysis of the human and the chimpanzee genome sequences.
Hahn Y; Lee B
Bioinformatics; 2005 Jun; 21 Suppl 1():i186-94. PubMed ID: 15961456
[TBL] [Abstract][Full Text] [Related]
6. InSNP: a tool for automated detection and visualization of SNPs and InDels.
Manaster C; Zheng W; Teuber M; Wächter S; Döring F; Schreiber S; Hampe J
Hum Mutat; 2005 Jul; 26(1):11-9. PubMed ID: 15931688
[TBL] [Abstract][Full Text] [Related]
7. Human-specific insertions and deletions inferred from mammalian genome sequences.
Chen FC; Chen CJ; Li WH; Chuang TJ
Genome Res; 2007 Jan; 17(1):16-22. PubMed ID: 17095709
[TBL] [Abstract][Full Text] [Related]
8. Meta-analysis of indels causing human genetic disease: mechanisms of mutagenesis and the role of local DNA sequence complexity.
Chuzhanova NA; Anassis EJ; Ball EV; Krawczak M; Cooper DN
Hum Mutat; 2003 Jan; 21(1):28-44. PubMed ID: 12497629
[TBL] [Abstract][Full Text] [Related]
9. CID-miRNA: a web server for prediction of novel miRNA precursors in human genome.
Tyagi S; Vaz C; Gupta V; Bhatia R; Maheshwari S; Srinivasan A; Bhattacharya A
Biochem Biophys Res Commun; 2008 Aug; 372(4):831-4. PubMed ID: 18522801
[TBL] [Abstract][Full Text] [Related]
10. A search tool for identification and analysis of conserved sequence patterns in Saccharomyces spp. orthologous promoter.
Kohli DK; Srikanth CV; Bachhawat AK
In Silico Biol; 2004; 4(4):411-5. PubMed ID: 15506991
[TBL] [Abstract][Full Text] [Related]
11. Automated splicing mutation analysis by information theory.
Nalla VK; Rogan PK
Hum Mutat; 2005 Apr; 25(4):334-42. PubMed ID: 15776446
[TBL] [Abstract][Full Text] [Related]
12. Indel seeds for homology search.
Mak D; Gelfand Y; Benson G
Bioinformatics; 2006 Jul; 22(14):e341-9. PubMed ID: 16873491
[TBL] [Abstract][Full Text] [Related]
13. Improving sequence variant descriptions in mutation databases and literature using the Mutalyzer sequence variation nomenclature checker.
Wildeman M; van Ophuizen E; den Dunnen JT; Taschner PE
Hum Mutat; 2008 Jan; 29(1):6-13. PubMed ID: 18000842
[TBL] [Abstract][Full Text] [Related]
14. SPInDel: a multifunctional workbench for species identification using insertion/deletion variants.
Carneiro J; Pereira F; Amorim A
Mol Ecol Resour; 2012 Nov; 12(6):1190-5. PubMed ID: 22978681
[TBL] [Abstract][Full Text] [Related]
15. Comprehensive identification and characterization of diallelic insertion-deletion polymorphisms in 330 human candidate genes.
Bhangale TR; Rieder MJ; Livingston RJ; Nickerson DA
Hum Mol Genet; 2005 Jan; 14(1):59-69. PubMed ID: 15525656
[TBL] [Abstract][Full Text] [Related]
16. Short indels are subject to insertion-biased gene conversion.
Leushkin EV; Bazykin GA
Evolution; 2013 Sep; 67(9):2604-13. PubMed ID: 24033170
[TBL] [Abstract][Full Text] [Related]
17. Empirical analysis of protein insertions and deletions determining parameters for the correct placement of gaps in protein sequence alignments.
Chang MS; Benner SA
J Mol Biol; 2004 Aug; 341(2):617-31. PubMed ID: 15276848
[TBL] [Abstract][Full Text] [Related]
18. Close association between paralogous multiple isomiRs and paralogous/orthologues miRNA sequences implicates dominant sequence selection across various animal species.
Guo L; Zhao Y; Zhang H; Yang S; Chen F
Gene; 2013 Sep; 527(2):624-9. PubMed ID: 23856130
[TBL] [Abstract][Full Text] [Related]
19. indel-Seq-Gen: a new protein family simulator incorporating domains, motifs, and indels.
Strope CL; Scott SD; Moriyama EN
Mol Biol Evol; 2007 Mar; 24(3):640-9. PubMed ID: 17158778
[TBL] [Abstract][Full Text] [Related]
20. BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
Luo Y; Fu C; Zhang DY; Lin K
BMC Bioinformatics; 2007 Jul; 8():266. PubMed ID: 17650344
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]