These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 17537749)

  • 1. Short oligonucleotide probes containing G-stacks display abnormal binding affinity on Affymetrix microarrays.
    Wu C; Zhao H; Baggerly K; Carta R; Zhang L
    Bioinformatics; 2007 Oct; 23(19):2566-72. PubMed ID: 17537749
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PhylArray: phylogenetic probe design algorithm for microarray.
    Militon C; Rimour S; Missaoui M; Biderre C; Barra V; Hill D; Moné A; Gagne G; Meier H; Peyretaillade E; Peyret P
    Bioinformatics; 2007 Oct; 23(19):2550-7. PubMed ID: 17698494
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Decoding non-unique oligonucleotide hybridization experiments of targets related by a phylogenetic tree.
    Schliep A; Rahmann S
    Bioinformatics; 2006 Jul; 22(14):e424-30. PubMed ID: 16873503
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.
    Di X; Matsuzaki H; Webster TA; Hubbell E; Liu G; Dong S; Bartell D; Huang J; Chiles R; Yang G; Shen MM; Kulp D; Kennedy GC; Mei R; Jones KW; Cawley S
    Bioinformatics; 2005 May; 21(9):1958-63. PubMed ID: 15657097
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Picky: oligo microarray design for large genomes.
    Chou HH; Hsia AP; Mooney DL; Schnable PS
    Bioinformatics; 2004 Nov; 20(17):2893-902. PubMed ID: 15180932
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An application for assessing quality of RNA hybridized to Affymetrix GeneChips.
    Archer KJ; Guennel T
    Bioinformatics; 2006 Nov; 22(21):2699-701. PubMed ID: 16935927
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays.
    Binder H; Preibisch S; Kirsten T
    Langmuir; 2005 Sep; 21(20):9287-302. PubMed ID: 16171364
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Probes containing runs of guanines provide insights into the biophysics and bioinformatics of Affymetrix GeneChips.
    Langdon WB; Upton GJ; Harrison AP
    Brief Bioinform; 2009 May; 10(3):259-77. PubMed ID: 19359259
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Optimal robust non-unique probe selection using Integer Linear Programming.
    Klau GW; Rahmann S; Schliep A; Vingron M; Reinert K
    Bioinformatics; 2004 Aug; 20 Suppl 1():i186-93. PubMed ID: 15262798
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Model-P: a basecalling method for resequencing microarrays of diploid samples.
    Zhan Y; Kulp D
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii182-9. PubMed ID: 16204100
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.
    Alberts R; Terpstra P; Hardonk M; Bystrykh LV; de Haan G; Breitling R; Nap JP; Jansen RC
    BMC Bioinformatics; 2007 Apr; 8():132. PubMed ID: 17448222
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Group testing with DNA chips: generating designs and decoding experiments.
    Schliep A; Torney DC; Rahmann S
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():84-91. PubMed ID: 16452782
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy.
    Hu G; Llinás M; Li J; Preiser PR; Bozdech Z
    BMC Bioinformatics; 2007 Sep; 8():350. PubMed ID: 17880708
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays.
    Furusawa C; Ono N; Suzuki S; Agata T; Shimizu H; Yomo T
    Bioinformatics; 2009 Jan; 25(1):36-41. PubMed ID: 18977779
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Analysis of crucial factors resulting in microarray hybridization failure.
    Wei T; Pearson MN; Armstrong K; Blohm D; Liu J
    Mol Biosyst; 2012 Apr; 8(4):1325-38. PubMed ID: 22314967
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Rapid large-scale oligonucleotide selection for microarrays.
    Rahmann S
    Proc IEEE Comput Soc Bioinform Conf; 2002; 1():54-63. PubMed ID: 15838123
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A competitive hybridization model predicts probe signal intensity on high density DNA microarrays.
    Li S; Pozhitkov A; Brouwer M
    Nucleic Acids Res; 2008 Nov; 36(20):6585-91. PubMed ID: 18931378
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.
    Seo J; Bakay M; Chen YW; Hilmer S; Shneiderman B; Hoffman EP
    Bioinformatics; 2004 Nov; 20(16):2534-44. PubMed ID: 15117752
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Assessing the need for sequence-based normalization in tiling microarray experiments.
    Royce TE; Rozowsky JS; Gerstein MB
    Bioinformatics; 2007 Apr; 23(8):988-97. PubMed ID: 17387113
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A method for cross-species gene expression analysis with high-density oligonucleotide arrays.
    Ji W; Zhou W; Gregg K; Yu N; Davis S; Davis S
    Nucleic Acids Res; 2004; 32(11):e93. PubMed ID: 15247326
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.