442 related articles for article (PubMed ID: 17547772)
21. MultiSimNeNc: A network representation learning-based module identification method by network embedding and clustering.
Wu H; Liang B; Chen Z; Zhang H
Comput Biol Med; 2023 Apr; 156():106703. PubMed ID: 36889026
[TBL] [Abstract][Full Text] [Related]
22. Motif-role-fingerprints: the building-blocks of motifs, clustering-coefficients and transitivities in directed networks.
McDonnell MD; Yaveroğlu ÖN; Schmerl BA; Iannella N; Ward LM
PLoS One; 2014; 9(12):e114503. PubMed ID: 25486535
[TBL] [Abstract][Full Text] [Related]
23. SigFlux: a novel network feature to evaluate the importance of proteins in signal transduction networks.
Liu W; Li D; Zhang J; Zhu Y; He F
BMC Bioinformatics; 2006 Nov; 7():515. PubMed ID: 17129367
[TBL] [Abstract][Full Text] [Related]
24. A grid layout algorithm for automatic drawing of biochemical networks.
Li W; Kurata H
Bioinformatics; 2005 May; 21(9):2036-42. PubMed ID: 15677705
[TBL] [Abstract][Full Text] [Related]
25. Predicting node characteristics from molecular networks.
Mostafavi S; Goldenberg A; Morris Q
Methods Mol Biol; 2011; 781():399-414. PubMed ID: 21877293
[TBL] [Abstract][Full Text] [Related]
26. Detecting functional modules in the yeast protein-protein interaction network.
Chen J; Yuan B
Bioinformatics; 2006 Sep; 22(18):2283-90. PubMed ID: 16837529
[TBL] [Abstract][Full Text] [Related]
27. Clustering under the line graph transformation: application to reaction network.
Nacher JC; Ueda N; Yamada T; Kanehisa M; Akutsu T
BMC Bioinformatics; 2004 Dec; 5():207. PubMed ID: 15617578
[TBL] [Abstract][Full Text] [Related]
28. CCor: A whole genome network-based similarity measure between two genes.
Hu Y; Zhao H
Biometrics; 2016 Dec; 72(4):1216-1225. PubMed ID: 26953524
[TBL] [Abstract][Full Text] [Related]
29. MAVisto: a tool for biological network motif analysis.
Schwöbbermeyer H; Wünschiers R
Methods Mol Biol; 2012; 804():263-80. PubMed ID: 22144158
[TBL] [Abstract][Full Text] [Related]
30. Improving the sensitivity of sample clustering by leveraging gene co-expression networks in variable selection.
Wang Z; San Lucas FA; Qiu P; Liu Y
BMC Bioinformatics; 2014 May; 15():153. PubMed ID: 24885641
[TBL] [Abstract][Full Text] [Related]
31. Deciphering the connectivity structure of biological networks using MixNet.
Picard F; Miele V; Daudin JJ; Cottret L; Robin S
BMC Bioinformatics; 2009 Jun; 10 Suppl 6(Suppl 6):S17. PubMed ID: 19534742
[TBL] [Abstract][Full Text] [Related]
32. Node sampling for protein complex estimation in bait-prey graphs.
Scholtens DM; Spencer BD
Stat Appl Genet Mol Biol; 2015 Aug; 14(4):391-411. PubMed ID: 26226130
[TBL] [Abstract][Full Text] [Related]
33. Gene clustering via integrated Markov models combining individual and pairwise features.
Vignes M; Forbes F
IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(2):260-70. PubMed ID: 19407350
[TBL] [Abstract][Full Text] [Related]
34. Network legos: building blocks of cellular wiring diagrams.
Murali TM; Rivera CG
J Comput Biol; 2008 Sep; 15(7):829-44. PubMed ID: 18707557
[TBL] [Abstract][Full Text] [Related]
35. Modeling complex metabolic reactions, ecological systems, and financial and legal networks with MIANN models based on Markov-Wiener node descriptors.
Duardo-Sánchez A; Munteanu CR; Riera-Fernández P; López-Díaz A; Pazos A; González-Díaz H
J Chem Inf Model; 2014 Jan; 54(1):16-29. PubMed ID: 24320872
[TBL] [Abstract][Full Text] [Related]
36. Gene expression complex networks: synthesis, identification, and analysis.
Lopes FM; Cesar RM; Costa Lda F
J Comput Biol; 2011 Oct; 18(10):1353-67. PubMed ID: 21548810
[TBL] [Abstract][Full Text] [Related]
37. Discovering functions and revealing mechanisms at molecular level from biological networks.
Zhang S; Jin G; Zhang XS; Chen L
Proteomics; 2007 Aug; 7(16):2856-69. PubMed ID: 17703505
[TBL] [Abstract][Full Text] [Related]
38. Optimizing weighted gene co-expression network analysis with a multi-threaded calculation of the topological overlap matrix.
Shuai M; He D; Chen X
Stat Appl Genet Mol Biol; 2021 Nov; 20(4-6):145-153. PubMed ID: 34757703
[TBL] [Abstract][Full Text] [Related]
39. MGclus: network clustering employing shared neighbors.
Frings O; Alexeyenko A; Sonnhammer EL
Mol Biosyst; 2013 Jul; 9(7):1670-5. PubMed ID: 23396516
[TBL] [Abstract][Full Text] [Related]
40. From molecular to biological structure and back.
Bonchev D; Buck GA
J Chem Inf Model; 2007; 47(3):909-17. PubMed ID: 17407281
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]