These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
93 related articles for article (PubMed ID: 17557333)
1. New classification of supersecondary structures of sandwich-like proteins uncovers strict patterns of strand assemblage. Chiang YS; Gelfand TI; Kister AE; Gelfand IM Proteins; 2007 Sep; 68(4):915-21. PubMed ID: 17557333 [TBL] [Abstract][Full Text] [Related]
2. Common features in structures and sequences of sandwich-like proteins. Kister AE; Finkelstein AV; Gelfand IM Proc Natl Acad Sci U S A; 2002 Oct; 99(22):14137-41. PubMed ID: 12384574 [TBL] [Abstract][Full Text] [Related]
3. TOPS: an enhanced database of protein structural topology. Michalopoulos I; Torrance GM; Gilbert DR; Westhead DR Nucleic Acids Res; 2004 Jan; 32(Database issue):D251-4. PubMed ID: 14681405 [TBL] [Abstract][Full Text] [Related]
4. Strict rules determine arrangements of strands in sandwich proteins. Kister AE; Fokas AS; Papatheodorou TS; Gelfand IM Proc Natl Acad Sci U S A; 2006 Mar; 103(11):4107-10. PubMed ID: 16537492 [TBL] [Abstract][Full Text] [Related]
5. Structural classification of alphabetabeta and betabetaalpha supersecondary structure units in proteins. Boutonnet NS; Kajava AV; Rooman MJ Proteins; 1998 Feb; 30(2):193-212. PubMed ID: 9489927 [TBL] [Abstract][Full Text] [Related]
6. A geometric construction determines all permissible strand arrangements of sandwich proteins. Fokas AS; Papatheodorou TS; Kister AE; Gelfand IM Proc Natl Acad Sci U S A; 2005 Nov; 102(44):15851-3. PubMed ID: 16249331 [TBL] [Abstract][Full Text] [Related]
7. Patterns, structures, and amino acid frequencies in structural building blocks, a protein secondary structure classification scheme. Fetrow JS; Palumbo MJ; Berg G Proteins; 1997 Feb; 27(2):249-71. PubMed ID: 9061789 [TBL] [Abstract][Full Text] [Related]
8. Prediction of the structural motifs of sandwich proteins. Fokas AS; Gelfand IM; Kister AE Proc Natl Acad Sci U S A; 2004 Nov; 101(48):16780-3. PubMed ID: 15550537 [TBL] [Abstract][Full Text] [Related]
9. [Super-secondary structure of beta-proteins]. Efimov AV Mol Biol (Mosk); 1982; 16(4):799-806. PubMed ID: 7121463 [TBL] [Abstract][Full Text] [Related]
10. Structural plasticity associated with the beta-propeller architecture. Guruprasad K; Dhamayanthi P Int J Biol Macromol; 2004 Apr; 34(1-2):55-61. PubMed ID: 15178010 [TBL] [Abstract][Full Text] [Related]
11. Protein decoy assembly using short fragments under geometric constraints. Kolodny R; Levitt M Biopolymers; 2003 Mar; 68(3):278-85. PubMed ID: 12601789 [TBL] [Abstract][Full Text] [Related]
12. Contact patterns between helices and strands of sheet define protein folding patterns. Kamat AP; Lesk AM Proteins; 2007 Mar; 66(4):869-76. PubMed ID: 17206659 [TBL] [Abstract][Full Text] [Related]
13. Integrated search and alignment of protein structures. Sacan A; Toroslu IH; Ferhatosmanoglu H Bioinformatics; 2008 Dec; 24(24):2872-9. PubMed ID: 18945684 [TBL] [Abstract][Full Text] [Related]
14. Prediction of turn types in protein structure by machine-learning classifiers. Meissner M; Koch O; Klebe G; Schneider G Proteins; 2009 Feb; 74(2):344-52. PubMed ID: 18618702 [TBL] [Abstract][Full Text] [Related]
15. Protein structure mining using a structural alphabet. Tyagi M; de Brevern AG; Srinivasan N; Offmann B Proteins; 2008 May; 71(2):920-37. PubMed ID: 18004784 [TBL] [Abstract][Full Text] [Related]
16. Finding of residues crucial for supersecondary structure formation. Kister AE; Gelfand I Proc Natl Acad Sci U S A; 2009 Nov; 106(45):18996-9000. PubMed ID: 19855006 [TBL] [Abstract][Full Text] [Related]
17. A comparative view at comprehensive information resources on three-dimensional structures of biological macro-molecules. Hühne R; Koch FT; Sühnel J Brief Funct Genomic Proteomic; 2007 Sep; 6(3):220-39. PubMed ID: 17956938 [TBL] [Abstract][Full Text] [Related]
18. Mining super-secondary structure motifs from 3d protein structures: a sequence order independent approach. Aung Z; Li J Genome Inform; 2007; 19():15-26. PubMed ID: 18546501 [TBL] [Abstract][Full Text] [Related]