BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

326 related articles for article (PubMed ID: 17570149)

  • 1. Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages.
    Li J; Halgamuge SK; Kells CI; Tang SL
    BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S6. PubMed ID: 17570149
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CLAGen: a tool for clustering and annotating gene sequences using a suffix tree algorithm.
    Han Si; Lee SG; Kim KH; Choi CJ; Kim YH; Hwang KS
    Biosystems; 2006 Jun; 84(3):175-82. PubMed ID: 16384634
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OrthologID: automation of genome-scale ortholog identification within a parsimony framework.
    Chiu JC; Lee EK; Egan MG; Sarkar IN; Coruzzi GM; DeSalle R
    Bioinformatics; 2006 Mar; 22(6):699-707. PubMed ID: 16410324
    [TBL] [Abstract][Full Text] [Related]  

  • 4. HomologMiner: looking for homologous genomic groups in whole genomes.
    Hou M; Berman P; Hsu CH; Harris RS
    Bioinformatics; 2007 Apr; 23(8):917-25. PubMed ID: 17308341
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Reticulate representation of evolutionary and functional relationships between phage genomes.
    Lima-Mendez G; Van Helden J; Toussaint A; Leplae R
    Mol Biol Evol; 2008 Apr; 25(4):762-77. PubMed ID: 18234706
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Identifying clusters of functionally related genes in genomes.
    Yi G; Sze SH; Thon MR
    Bioinformatics; 2007 May; 23(9):1053-60. PubMed ID: 17237058
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
    Liu Z; Meng J; Sun X
    Biochem Biophys Res Commun; 2008 Apr; 368(2):223-30. PubMed ID: 18230342
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Identification of coding and non-coding sequences using local Holder exponent formalism.
    Kulkarni OC; Vigneshwar R; Jayaraman VK; Kulkarni BD
    Bioinformatics; 2005 Oct; 21(20):3818-23. PubMed ID: 16118261
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A segmentation/clustering model for the analysis of array CGH data.
    Picard F; Robin S; Lebarbier E; Daudin JJ
    Biometrics; 2007 Sep; 63(3):758-66. PubMed ID: 17825008
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Natural similarity measures between position frequency matrices with an application to clustering.
    Pape UJ; Rahmann S; Vingron M
    Bioinformatics; 2008 Feb; 24(3):350-7. PubMed ID: 18174183
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes.
    Parra G; Bradnam K; Korf I
    Bioinformatics; 2007 May; 23(9):1061-7. PubMed ID: 17332020
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Homology search for genes.
    Cui X; Vinar T; Brejová B; Shasha D; Li M
    Bioinformatics; 2007 Jul; 23(13):i97-103. PubMed ID: 17646351
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Finding cis-regulatory modules in Drosophila using phylogenetic hidden Markov models.
    Wong WS; Nielsen R
    Bioinformatics; 2007 Aug; 23(16):2031-7. PubMed ID: 17550911
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Array2BIO: from microarray expression data to functional annotation of co-regulated genes.
    Loots GG; Chain PS; Mabery S; Rasley A; Garcia E; Ovcharenko I
    BMC Bioinformatics; 2006 Jun; 7():307. PubMed ID: 16780584
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Statistical detection of chromosomal homology using shared-gene density alone.
    Hampson SE; Gaut BS; Baldi P
    Bioinformatics; 2005 Apr; 21(8):1339-48. PubMed ID: 15585535
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Divisive Correlation Clustering Algorithm (DCCA) for grouping of genes: detecting varying patterns in expression profiles.
    Bhattacharya A; De RK
    Bioinformatics; 2008 Jun; 24(11):1359-66. PubMed ID: 18407922
    [TBL] [Abstract][Full Text] [Related]  

  • 19. WindowMasker: window-based masker for sequenced genomes.
    Morgulis A; Gertz EM; Schäffer AA; Agarwala R
    Bioinformatics; 2006 Jan; 22(2):134-41. PubMed ID: 16287941
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Clustering of change patterns using Fourier coefficients.
    Kim J; Kim H
    Bioinformatics; 2008 Jan; 24(2):184-91. PubMed ID: 18025003
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.