These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

89 related articles for article (PubMed ID: 1758880)

  • 1. FASTRUN: a special purpose, hardwired computer for molecular simulation.
    Fine R; Dimmler G; Levinthal C
    Proteins; 1991; 11(4):242-53. PubMed ID: 1758880
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A special-purpose computer for molecular dynamics: GRAPE-2A.
    Ito T; Fukushige T; Makino J; Ebisuzaki T; Okumura SK; Sugimoto D; Miyagawa H; Kitamura K
    Proteins; 1994 Oct; 20(2):139-48. PubMed ID: 7846024
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Symplectic molecular dynamics simulations on specially designed parallel computers.
    Borstnik U; Janezic D
    J Chem Inf Model; 2005; 45(6):1600-4. PubMed ID: 16309260
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Application of MDGRAPE-3, a special purpose board for molecular dynamics simulations, to periodic biomolecular systems.
    Kikugawa G; Apostolov R; Kamiya N; Taiji M; Himeno R; Nakamura H; Yonezawa Y
    J Comput Chem; 2009 Jan; 30(1):110-8. PubMed ID: 18524021
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Development of hardware accelerator for molecular dynamics simulations: a computation board that calculates nonbonded interactions in cooperation with fast multipole method.
    Amisaki T; Toyoda S; Miyagawa H; Kitamura K
    J Comput Chem; 2003 Apr; 24(5):582-92. PubMed ID: 12632472
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Accelerating molecular modeling applications with graphics processors.
    Stone JE; Phillips JC; Freddolino PL; Hardy DJ; Trabuco LG; Schulten K
    J Comput Chem; 2007 Dec; 28(16):2618-40. PubMed ID: 17894371
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The impact of accelerator processors for high-throughput molecular modeling and simulation.
    Giupponi G; Harvey MJ; De Fabritiis G
    Drug Discov Today; 2008 Dec; 13(23-24):1052-8. PubMed ID: 18762274
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA; Mehler EL; Zhang D; Weinstein H
    Proteins; 2003 Apr; 51(1):109-25. PubMed ID: 12596268
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Parallel supercomputers for lattice gauge theory.
    Brown FR; Christ NH
    Science; 1988 Mar; 239(4846):1393-400. PubMed ID: 17769735
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Coordination number of zinc ions in the phosphotriesterase active site by molecular dynamics and quantum mechanics.
    Koca J; Zhan CG; Rittenhouse RC; Ornstein RL
    J Comput Chem; 2003 Feb; 24(3):368-78. PubMed ID: 12548728
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DL_POLY_2.0: a general-purpose parallel molecular dynamics simulation package.
    Smith W; Forester TR
    J Mol Graph; 1996 Jun; 14(3):136-41. PubMed ID: 8901641
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Hetero-ring-expansion design for adenine-based DNA motifs: evidence from DFT calculations and molecular dynamics simulations.
    Han L; Li H; Cukier RI; Bu Y
    J Phys Chem B; 2009 Apr; 113(13):4407-12. PubMed ID: 19245224
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Mechanical model of the tubulin dimer based on molecular dynamics simulations.
    Enemark S; Deriu MA; Soncini M; Redaelli A
    J Biomech Eng; 2008 Aug; 130(4):041008. PubMed ID: 18601450
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computer simulations of a tumor surface octapeptide epitope.
    Reid RH; Hooper CA; Brooks BR
    Biopolymers; 1989 Jan; 28(1):525-30. PubMed ID: 2470439
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A molecular mechanics force field for lignin.
    Petridis L; Smith JC
    J Comput Chem; 2009 Feb; 30(3):457-67. PubMed ID: 18677707
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [Hardware and software for X-ray therapy planning].
    Zhizniakov AL; Semenov SI; Sushkova LT; Troitskii DP; Chirkov KV
    Med Tekh; 2007; (5):25-7. PubMed ID: 18030771
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Rational surface design for molecular dynamics simulations of porous polymer adsorbent media.
    Riccardi E; Wang JC; Liapis AI
    J Phys Chem B; 2008 Jun; 112(25):7478-88. PubMed ID: 18517244
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Long-timescale molecular dynamics simulations of protein structure and function.
    Klepeis JL; Lindorff-Larsen K; Dror RO; Shaw DE
    Curr Opin Struct Biol; 2009 Apr; 19(2):120-7. PubMed ID: 19361980
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Quantum mechanics/molecular mechanics minimum free-energy path for accurate reaction energetics in solution and enzymes: sequential sampling and optimization on the potential of mean force surface.
    Hu H; Lu Z; Parks JM; Burger SK; Yang W
    J Chem Phys; 2008 Jan; 128(3):034105. PubMed ID: 18205486
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DL_POLY_3: the CCP5 national UK code for molecular-dynamics simulations.
    Todorov IT; Smith W
    Philos Trans A Math Phys Eng Sci; 2004 Sep; 362(1822):1835-52. PubMed ID: 15306418
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.