BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 17597870)

  • 1. Identification of hot spot residues at protein-protein interface.
    Li L; Zhao B; Cui Z; Gan J; Sakharkar MK; Kangueane P
    Bioinformation; 2006 Apr; 1(4):121-6. PubMed ID: 17597870
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DBAC: a simple prediction method for protein binding hot spots based on burial levels and deeply buried atomic contacts.
    Li Z; Wong L; Li J
    BMC Syst Biol; 2011 Jun; 5 Suppl 1(Suppl 1):S5. PubMed ID: 21689480
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy.
    Tuncbag N; Gursoy A; Keskin O
    Bioinformatics; 2009 Jun; 25(12):1513-20. PubMed ID: 19357097
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods.
    Lise S; Archambeau C; Pontil M; Jones DT
    BMC Bioinformatics; 2009 Oct; 10():365. PubMed ID: 19878545
    [TBL] [Abstract][Full Text] [Related]  

  • 5. APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility.
    Xia JF; Zhao XM; Song J; Huang DS
    BMC Bioinformatics; 2010 Apr; 11():174. PubMed ID: 20377884
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Computational identification of binding energy hot spots in protein-RNA complexes using an ensemble approach.
    Pan Y; Wang Z; Zhan W; Deng L
    Bioinformatics; 2018 May; 34(9):1473-1480. PubMed ID: 29281004
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Machine Learning Approaches for Protein⁻Protein Interaction Hot Spot Prediction: Progress and Comparative Assessment.
    Liu S; Liu C; Deng L
    Molecules; 2018 Oct; 23(10):. PubMed ID: 30287797
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Relationship between hot spot residues and ligand binding hot spots in protein-protein interfaces.
    Zerbe BS; Hall DR; Vajda S; Whitty A; Kozakov D
    J Chem Inf Model; 2012 Aug; 52(8):2236-44. PubMed ID: 22770357
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Identification of hot-spot residues in protein-protein interactions by computational docking.
    Grosdidier S; Fernández-Recio J
    BMC Bioinformatics; 2008 Oct; 9():447. PubMed ID: 18939967
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Anatomy of hot spots in protein interfaces.
    Bogan AA; Thorn KS
    J Mol Biol; 1998 Jul; 280(1):1-9. PubMed ID: 9653027
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein subunit interfaces: A statistical analysis of hot spots in Sm proteins.
    Stojanović SD; Zarić BL; Zarić SD
    J Mol Model; 2010 Nov; 16(11):1743-51. PubMed ID: 20652820
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Computationally identifying hot spots in protein-DNA binding interfaces using an ensemble approach.
    Pan Y; Zhou S; Guan J
    BMC Bioinformatics; 2020 Sep; 21(Suppl 13):384. PubMed ID: 32938375
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Enhanced Prediction of Hot Spots at Protein-Protein Interfaces Using Extreme Gradient Boosting.
    Wang H; Liu C; Deng L
    Sci Rep; 2018 Sep; 8(1):14285. PubMed ID: 30250210
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An automated decision-tree approach to predicting protein interaction hot spots.
    Darnell SJ; Page D; Mitchell JC
    Proteins; 2007 Sep; 68(4):813-23. PubMed ID: 17554779
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Co-Occurring Atomic Contacts for the Characterization of Protein Binding Hot Spots.
    Liu Q; Ren J; Song J; Li J
    PLoS One; 2015; 10(12):e0144486. PubMed ID: 26675422
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A semi-supervised boosting SVM for predicting hot spots at protein-protein interfaces.
    Xu B; Wei X; Deng L; Guan J; Zhou S
    BMC Syst Biol; 2012; 6 Suppl 2(Suppl 2):S6. PubMed ID: 23282146
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An improved DNA-binding hot spot residues prediction method by exploring interfacial neighbor properties.
    Zhang S; Wang L; Zhao L; Li M; Liu M; Li K; Bin Y; Xia J
    BMC Bioinformatics; 2021 May; 22(Suppl 3):253. PubMed ID: 34000983
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Analysis of single amino acid variations in singlet hot spots of protein-protein interfaces.
    Ozdemir ES; Gursoy A; Keskin O
    Bioinformatics; 2018 Sep; 34(17):i795-i801. PubMed ID: 30423104
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Protein-protein interactions; coupling of structurally conserved residues and of hot spots across interfaces. Implications for docking.
    Halperin I; Wolfson H; Nussinov R
    Structure; 2004 Jun; 12(6):1027-38. PubMed ID: 15274922
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues.
    Keskin O; Ma B; Nussinov R
    J Mol Biol; 2005 Feb; 345(5):1281-94. PubMed ID: 15644221
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.