BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

590 related articles for article (PubMed ID: 17600828)

  • 1. Specificity of helix packing in transmembrane dimer of the cell death factor BNIP3: a molecular modeling study.
    Vereshaga YA; Volynsky PE; Pustovalova JE; Nolde DE; Arseniev AS; Efremov RG
    Proteins; 2007 Nov; 69(2):309-25. PubMed ID: 17600828
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Membrane-insertion fragments of Bcl-xL, Bax, and Bid.
    García-Sáez AJ; Mingarro I; Pérez-Payá E; Salgado J
    Biochemistry; 2004 Aug; 43(34):10930-43. PubMed ID: 15323553
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Systematic molecular dynamics searching in a lipid bilayer: application to the glycophorin A and oncogenic ErbB-2 transmembrane domains.
    Beevers AJ; Kukol A
    J Mol Graph Model; 2006 Oct; 25(2):226-33. PubMed ID: 16434222
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations.
    Petrache HI; Grossfield A; MacKenzie KR; Engelman DM; Woolf TB
    J Mol Biol; 2000 Sep; 302(3):727-46. PubMed ID: 10986130
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computer simulations and modeling-assisted ToxR screening in deciphering 3D structures of transmembrane alpha-helical dimers: ephrin receptor A1.
    Volynsky PE; Mineeva EA; Goncharuk MV; Ermolyuk YS; Arseniev AS; Efremov RG
    Phys Biol; 2010 Mar; 7():16014. PubMed ID: 20228445
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular dynamics (MD) investigations of preformed structures of the transmembrane domain of the oncogenic Neu receptor dimer in a DMPC bilayer.
    Aller P; Voiry L; Garnier N; Genest M
    Biopolymers; 2005 Mar; 77(4):184-97. PubMed ID: 15660449
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Energetics and stability of transmembrane helix packing: a replica-exchange simulation with a knowledge-based membrane potential.
    Chen Z; Xu Y
    Proteins; 2006 Feb; 62(2):539-52. PubMed ID: 16299775
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Insights into the recognition and association of transmembrane alpha-helices. The free energy of alpha-helix dimerization in glycophorin A.
    Hénin J; Pohorille A; Chipot C
    J Am Chem Soc; 2005 Jun; 127(23):8478-84. PubMed ID: 15941282
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A solvent model for simulations of peptides in bilayers. II. Membrane-spanning alpha-helices.
    Efremov RG; Nolde DE; Vergoten G; Arseniev AS
    Biophys J; 1999 May; 76(5):2460-71. PubMed ID: 10233063
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genetic selection for and molecular dynamic modeling of a protein transmembrane domain multimerization motif from a random Escherichia coli genomic library.
    Leeds JA; Boyd D; Huber DR; Sonoda GK; Luu HT; Engelman DM; Beckwith J
    J Mol Biol; 2001 Oct; 313(1):181-95. PubMed ID: 11601855
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hydrophobic helical hairpins: design and packing interactions in membrane environments.
    Johnson RM; Heslop CL; Deber CM
    Biochemistry; 2004 Nov; 43(45):14361-9. PubMed ID: 15533040
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Sequence dependence of BNIP3 transmembrane domain dimerization implicates side-chain hydrogen bonding and a tandem GxxxG motif in specific helix-helix interactions.
    Sulistijo ES; MacKenzie KR
    J Mol Biol; 2006 Dec; 364(5):974-90. PubMed ID: 17049556
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Characterization of a membrane protein folding motif, the Ser zipper, using designed peptides.
    North B; Cristian L; Fu Stowell X; Lear JD; Saven JG; Degrado WF
    J Mol Biol; 2006 Jun; 359(4):930-9. PubMed ID: 16697010
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins.
    Adamian L; Liang J
    J Mol Biol; 2001 Aug; 311(4):891-907. PubMed ID: 11518538
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Energetics of the native and non-native states of the glycophorin transmembrane helix dimer.
    Mottamal M; Zhang J; Lazaridis T
    Proteins; 2006 Mar; 62(4):996-1009. PubMed ID: 16395713
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Computer modeling of polyleucine-based coiled coil dimers in a realistic membrane environment: insight into helix-helix interactions in membrane proteins.
    Ash WL; Stockner T; MacCallum JL; Tieleman DP
    Biochemistry; 2004 Jul; 43(28):9050-60. PubMed ID: 15248762
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mutagenesis data in the automated prediction of transmembrane helix dimers.
    Metcalf DG; Law PB; DeGrado WF
    Proteins; 2007 May; 67(2):375-84. PubMed ID: 17311347
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular dynamics simulations of the dimerization of transmembrane alpha-helices.
    Psachoulia E; Marshall DP; Sansom MS
    Acc Chem Res; 2010 Mar; 43(3):388-96. PubMed ID: 20017540
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Membrane-bound structure and energetics of alpha-synuclein.
    Mihajlovic M; Lazaridis T
    Proteins; 2008 Feb; 70(3):761-78. PubMed ID: 17729279
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A new approach to docking in the beta 2-adrenergic receptor that exploits the domain structure of G-protein-coupled receptors.
    Gouldson PR; Snell CR; Reynolds CA
    J Med Chem; 1997 Nov; 40(24):3871-86. PubMed ID: 9397168
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 30.