These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

152 related articles for article (PubMed ID: 17608928)

  • 1. Metabolic network visualization eliminating node redundance and preserving metabolic pathways.
    Bourqui R; Cottret L; Lacroix V; Auber D; Mary P; Sagot MF; Jourdan F
    BMC Syst Biol; 2007 Jul; 1():29. PubMed ID: 17608928
    [TBL] [Abstract][Full Text] [Related]  

  • 2. An integrated network visualization framework towards metabolic engineering applications.
    Noronha A; Vilaça P; Rocha M
    BMC Bioinformatics; 2014 Dec; 15(1):420. PubMed ID: 25547011
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Predicting metabolic pathways by sub-network extraction.
    Faust K; van Helden J
    Methods Mol Biol; 2012; 804():107-30. PubMed ID: 22144151
    [TBL] [Abstract][Full Text] [Related]  

  • 4. redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models.
    Ataman M; Hernandez Gardiol DF; Fengos G; Hatzimanikatis V
    PLoS Comput Biol; 2017 Jul; 13(7):e1005444. PubMed ID: 28727725
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.
    Kaleta C; de Figueiredo LF; Schuster S
    Genome Res; 2009 Oct; 19(10):1872-83. PubMed ID: 19541909
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis.
    Chandrasekaran S; Price ND
    Proc Natl Acad Sci U S A; 2010 Oct; 107(41):17845-50. PubMed ID: 20876091
    [TBL] [Abstract][Full Text] [Related]  

  • 7. GEMSiRV: a software platform for GEnome-scale metabolic model simulation, reconstruction and visualization.
    Liao YC; Tsai MH; Chen FC; Hsiung CA
    Bioinformatics; 2012 Jul; 28(13):1752-8. PubMed ID: 22563070
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Exploring metabolic pathways in genome-scale networks via generating flux modes.
    Rezola A; de Figueiredo LF; Brock M; Pey J; Podhorski A; Wittmann C; Schuster S; Bockmayr A; Planes FJ
    Bioinformatics; 2011 Feb; 27(4):534-40. PubMed ID: 21149278
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Hands-on metabolism analysis of complex biochemical networks using elementary flux modes.
    Schäuble S; Schuster S; Kaleta C
    Methods Enzymol; 2011; 500():437-56. PubMed ID: 21943910
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Tools-4-Metatool (T4M): online suite of web-tools to process stoichiometric network analysis data from Metatool.
    Xavier D; Vázquez S; Higuera C; Morán F; Montero F
    Biosystems; 2011 Aug; 105(2):169-72. PubMed ID: 21554926
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Flux-coupled genes and their use in metabolic flux analysis.
    Kim HU; Kim WJ; Lee SY
    Biotechnol J; 2013 Sep; 8(9):1035-42. PubMed ID: 23420780
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A graph-based approach to analyze flux-balanced pathways in metabolic networks.
    Arabzadeh M; Saheb Zamani M; Sedighi M; Marashi SA
    Biosystems; 2018 Mar; 165():40-51. PubMed ID: 29337084
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A reverse engineering approach to optimize experiments for the construction of biological regulatory networks.
    Zhang X; Shao B; Wu Y; Qi O
    PLoS One; 2013; 8(9):e75931. PubMed ID: 24069453
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MAVisto: a tool for biological network motif analysis.
    Schwöbbermeyer H; Wünschiers R
    Methods Mol Biol; 2012; 804():263-80. PubMed ID: 22144158
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Grohar: Automated Visualization of Genome-Scale Metabolic Models and Their Pathways.
    Moškon M; Zimic N; Mraz M
    J Comput Biol; 2018 May; 25(5):505-508. PubMed ID: 29461874
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Visualizing global properties of large complex networks.
    Li W; Kurata H
    PLoS One; 2008 Jul; 3(7):e2541. PubMed ID: 18648531
    [TBL] [Abstract][Full Text] [Related]  

  • 17. On the representativeness and stability of a set of EFMs.
    Guil F; Hidalgo JF; García JM
    Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37252834
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Including metabolite concentrations into flux balance analysis: thermodynamic realizability as a constraint on flux distributions in metabolic networks.
    Hoppe A; Hoffmann S; Holzhütter HG
    BMC Syst Biol; 2007 Jun; 1():23. PubMed ID: 17543097
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A practical guide to genome-scale metabolic models and their analysis.
    Santos F; Boele J; Teusink B
    Methods Enzymol; 2011; 500():509-32. PubMed ID: 21943912
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Flux balance analysis: interrogating genome-scale metabolic networks.
    Oberhardt MA; Chavali AK; Papin JA
    Methods Mol Biol; 2009; 500():61-80. PubMed ID: 19399432
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.