These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

220 related articles for article (PubMed ID: 17616223)

  • 1. Close contacts between carbonyl oxygen atoms and aromatic centers in protein structures: pi...pi or lone-pair...pi interactions?
    Jain A; Purohit CS; Verma S; Sankararamakrishnan R
    J Phys Chem B; 2007 Aug; 111(30):8680-3. PubMed ID: 17616223
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Lone pair ... pi interactions between water oxygens and aromatic residues: quantum chemical studies based on high-resolution protein structures and model compounds.
    Jain A; Ramanathan V; Sankararamakrishnan R
    Protein Sci; 2009 Mar; 18(3):595-605. PubMed ID: 19241386
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Quantum chemical investigations on intraresidue carbonyl-carbonyl contacts in aspartates of high-resolution protein structures.
    Pal TK; Sankararamakrishnan R
    J Phys Chem B; 2010 Jan; 114(2):1038-49. PubMed ID: 20039723
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Lone pair-aromatic interactions: to stabilize or not to stabilize.
    Egli M; Sarkhel S
    Acc Chem Res; 2007 Mar; 40(3):197-205. PubMed ID: 17370991
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Oxygen-aromatic contacts in intra-strand base pairs: analysis of high-resolution DNA crystal structures and quantum chemical calculations.
    Jain A; Krishna Deepak RNV; Sankararamakrishnan R
    J Struct Biol; 2014 Jul; 187(1):49-57. PubMed ID: 24816369
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Disulfide bonds, their stereospecific environment and conservation in protein structures.
    Bhattacharyya R; Pal D; Chakrabarti P
    Protein Eng Des Sel; 2004 Nov; 17(11):795-808. PubMed ID: 15576382
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Amide-pi interactions between formamide and benzene.
    Imai YN; Inoue Y; Nakanishi I; Kitaura K
    J Comput Chem; 2009 Nov; 30(14):2267-76. PubMed ID: 19263433
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Effects of the biological backbone on stacking interactions at DNA-protein interfaces: the interplay between the backbone···π and π···π components.
    Churchill CD; Rutledge LR; Wetmore SD
    Phys Chem Chem Phys; 2010 Nov; 12(43):14515-26. PubMed ID: 20927465
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Self-contacts in Asx and Glx residues of high-resolution protein structures: role of local environment and tertiary interactions.
    Pal TK; Sankararamakrishnan R
    J Mol Graph Model; 2008 Aug; 27(1):20-33. PubMed ID: 18343699
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A survey of aspartate-phenylalanine and glutamate-phenylalanine interactions in the protein data bank: searching for anion-π pairs.
    Philip V; Harris J; Adams R; Nguyen D; Spiers J; Baudry J; Howell EE; Hinde RJ
    Biochemistry; 2011 Apr; 50(14):2939-50. PubMed ID: 21366334
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CH/pi interactions involving aromatic amino acids: refinement of the CHARMM tryptophan force field.
    Macias AT; Mackerell AD
    J Comput Chem; 2005 Nov; 26(14):1452-63. PubMed ID: 16088926
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Strength of Calpha-H...O=C hydrogen bonds in transmembrane proteins.
    Park H; Yoon J; Seok C
    J Phys Chem B; 2008 Jan; 112(3):1041-8. PubMed ID: 18154287
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Influence of cation-pi interactions on RNA-binding proteins.
    Anbarasu A; Anand S; Mathew L; Sethumadhavan R
    Int J Biol Macromol; 2007 Apr; 40(5):479-83. PubMed ID: 17197018
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Impact of the chirality and curvature of carbon nanostructures on their interaction with aromatics and amino acids.
    Umadevi D; Sastry GN
    Chemphyschem; 2013 Aug; 14(11):2570-8. PubMed ID: 23650176
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Quantitative study of interactions between oxygen lone pair and aromatic rings: substituent effect and the importance of closeness of contact.
    Gung BW; Zou Y; Xu Z; Amicangelo JC; Irwin DG; Ma S; Zhou HC
    J Org Chem; 2008 Jan; 73(2):689-93. PubMed ID: 18081348
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The role of Buergi-Dunitz interactions in the structural stability of proteins.
    Fufezan C
    Proteins; 2010 Oct; 78(13):2831-8. PubMed ID: 20635415
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CH/pi interactions in DNA and proteins. A theoretical study.
    Gil A; Branchadell V; Bertran J; Oliva A
    J Phys Chem B; 2007 Aug; 111(31):9372-9. PubMed ID: 17625824
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Geometry of nonbonded interactions involving planar groups in proteins.
    Chakrabarti P; Bhattacharyya R
    Prog Biophys Mol Biol; 2007; 95(1-3):83-137. PubMed ID: 17629549
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Magnitude and nature of carbohydrate-aromatic interactions: ab initio calculations of fucose-benzene complex.
    Tsuzuki S; Uchimaru T; Mikami M
    J Phys Chem B; 2009 Apr; 113(16):5617-21. PubMed ID: 19331351
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Strong N-H...pi hydrogen bonding in amide-benzene interactions.
    Ottiger P; Pfaffen C; Leist R; Leutwyler S; Bachorz RA; Klopper W
    J Phys Chem B; 2009 Mar; 113(9):2937-43. PubMed ID: 19243205
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.