143 related articles for article (PubMed ID: 17623705)
1. Correcting for gene-specific dye bias in DNA microarrays using the method of maximum likelihood.
Kelley R; Feizi H; Ideker T
Bioinformatics; 2008 Jan; 24(1):71-7. PubMed ID: 17623705
[TBL] [Abstract][Full Text] [Related]
2. Evaluation of the gene-specific dye bias in cDNA microarray experiments.
Martin-Magniette ML; Aubert J; Cabannes E; Daudin JJ
Bioinformatics; 2005 May; 21(9):1995-2000. PubMed ID: 15691855
[TBL] [Abstract][Full Text] [Related]
3. A comparison of background correction methods for two-colour microarrays.
Ritchie ME; Silver J; Oshlack A; Holmes M; Diyagama D; Holloway A; Smyth GK
Bioinformatics; 2007 Oct; 23(20):2700-7. PubMed ID: 17720982
[TBL] [Abstract][Full Text] [Related]
4. Expression ratio evaluation in two-colour microarray experiments is significantly improved by correcting image misalignment.
Tang T; François N; Glatigny A; Agier N; Mucchielli MH; Aggerbeck L; Delacroix H
Bioinformatics; 2007 Oct; 23(20):2686-91. PubMed ID: 17698492
[TBL] [Abstract][Full Text] [Related]
5. A novel approach for high-quality microarray processing using third-dye array visualization technology.
Wang X; Jiang N; Feng X; Xie Y; Tonellato PJ; Ghosh S; Hessner MJ
IEEE Trans Nanobioscience; 2003 Dec; 2(4):193-201. PubMed ID: 15376909
[TBL] [Abstract][Full Text] [Related]
6. Characterizing dye bias in microarray experiments.
Dobbin KK; Kawasaki ES; Petersen DW; Simon RM
Bioinformatics; 2005 May; 21(10):2430-7. PubMed ID: 15774555
[TBL] [Abstract][Full Text] [Related]
7. Donuts, scratches and blanks: robust model-based segmentation of microarray images.
Li Q; Fraley C; Bumgarner RE; Yeung KY; Raftery AE
Bioinformatics; 2005 Jun; 21(12):2875-82. PubMed ID: 15845656
[TBL] [Abstract][Full Text] [Related]
8. Statistical methodology for the analysis of dye-switch microarray experiments.
Mary-Huard T; Aubert J; Mansouri-Attia N; Sandra O; Daudin JJ
BMC Bioinformatics; 2008 Feb; 9():98. PubMed ID: 18271965
[TBL] [Abstract][Full Text] [Related]
9. Comment on 'Evaluation of the gene-specific dye bias in cDNA microarray experiments'.
Dobbin KK; Shih JH; Simon RM
Bioinformatics; 2005 Jun; 21(12):2803-4. PubMed ID: 15817695
[No Abstract] [Full Text] [Related]
10. Improving gene quantification by adjustable spot-image restoration.
Daskalakis A; Cavouras D; Bougioukos P; Kostopoulos S; Glotsos D; Kalatzis I; Kagadis GC; Argyropoulos C; Nikiforidis G
Bioinformatics; 2007 Sep; 23(17):2265-72. PubMed ID: 17599935
[TBL] [Abstract][Full Text] [Related]
11. Assessing probe-specific dye and slide biases in two-color microarray data.
Lu R; Lee GC; Shultz M; Dardick C; Jung K; Phetsom J; Jia Y; Rice RH; Goldberg Z; Schnable PS; Ronald P; Rocke DM
BMC Bioinformatics; 2008 Jul; 9():314. PubMed ID: 18638416
[TBL] [Abstract][Full Text] [Related]
12. CALIB: a Bioconductor package for estimating absolute expression levels from two-color microarray data.
Zhao H; Engelen K; De Moor B; Marchal K
Bioinformatics; 2007 Jul; 23(13):1700-1. PubMed ID: 17485432
[TBL] [Abstract][Full Text] [Related]
13. Statistical estimation of gene expression using multiple laser scans of microarrays.
Khondoker MR; Glasbey CA; Worton BJ
Bioinformatics; 2006 Jan; 22(2):215-9. PubMed ID: 16303798
[TBL] [Abstract][Full Text] [Related]
14. An algorithm for automatic evaluation of the spot quality in two-color DNA microarray experiments.
Novikov E; Barillot E
BMC Bioinformatics; 2005 Dec; 6():293. PubMed ID: 16336688
[TBL] [Abstract][Full Text] [Related]
15. A robust neural networks approach for spatial and intensity-dependent normalization of cDNA microarray data.
Tarca AL; Cooke JE; Mackay J
Bioinformatics; 2005 Jun; 21(11):2674-83. PubMed ID: 15797913
[TBL] [Abstract][Full Text] [Related]
16. Background correction for cDNA microarray images using the TV+L1 model.
Yin W; Chen T; Zhou SX; Chakraborty A
Bioinformatics; 2005 May; 21(10):2410-6. PubMed ID: 15728112
[TBL] [Abstract][Full Text] [Related]
17. MAnGO: an interactive R-based tool for two-colour microarray analysis.
Marisa L; Ichanté JL; Reymond N; Aggerbeck L; Delacroix H; Mucchielli-Giorgi MH
Bioinformatics; 2007 Sep; 23(17):2339-41. PubMed ID: 17586547
[TBL] [Abstract][Full Text] [Related]
18. Normalization for triple-target microarray experiments.
Martin-Magniette ML; Aubert J; Bar-Hen A; Elftieh S; Magniette F; Renou JP; Daudin JJ
BMC Bioinformatics; 2008 Apr; 9():216. PubMed ID: 18442385
[TBL] [Abstract][Full Text] [Related]
19. Evaluating the performance of microarray segmentation algorithms.
Lehmussola A; Ruusuvuori P; Yli-Harja O
Bioinformatics; 2006 Dec; 22(23):2910-7. PubMed ID: 17032673
[TBL] [Abstract][Full Text] [Related]
20. MicroPreP: a cDNA microarray data pre-processing framework.
van Hijum SA; García de la Nava J; Trelles O; Kok J; Kuipers OP
Appl Bioinformatics; 2003; 2(4):241-4. PubMed ID: 15130795
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]