389 related articles for article (PubMed ID: 17629909)
1. Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment.
Ferragina P; Giancarlo R; Greco V; Manzini G; Valiente G
BMC Bioinformatics; 2007 Jul; 8():252. PubMed ID: 17629909
[TBL] [Abstract][Full Text] [Related]
2. Comparison study on k-word statistical measures for protein: from sequence to 'sequence space'.
Dai Q; Wang T
BMC Bioinformatics; 2008 Sep; 9():394. PubMed ID: 18811946
[TBL] [Abstract][Full Text] [Related]
3. Protein multiple sequence alignment benchmarking through secondary structure prediction.
Le Q; Sievers F; Higgins DG
Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
[TBL] [Abstract][Full Text] [Related]
4. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
5. Measuring the similarity of protein structures by means of the universal similarity metric.
Krasnogor N; Pelta DA
Bioinformatics; 2004 May; 20(7):1015-21. PubMed ID: 14751983
[TBL] [Abstract][Full Text] [Related]
6. ProClust: improved clustering of protein sequences with an extended graph-based approach.
Pipenbacher P; Schliep A; Schneckener S; Schönhuth A; Schomburg D; Schrader R
Bioinformatics; 2002; 18 Suppl 2():S182-91. PubMed ID: 12386002
[TBL] [Abstract][Full Text] [Related]
7. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
[TBL] [Abstract][Full Text] [Related]
8. LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification.
Filatov G; Bauwens B; Kertész-Farkas A
Bioinformatics; 2018 Oct; 34(19):3281-3288. PubMed ID: 29741583
[TBL] [Abstract][Full Text] [Related]
9. Detailed protein sequence alignment based on Spectral Similarity Score (SSS).
Gupta K; Thomas D; Vidya SV; Venkatesh KV; Ramakumar S
BMC Bioinformatics; 2005 Apr; 6():105. PubMed ID: 15850477
[TBL] [Abstract][Full Text] [Related]
10. ROC and confusion analysis of structure comparison methods identify the main causes of divergence from manual protein classification.
Sam V; Tai CH; Garnier J; Gibrat JF; Lee B; Munson PJ
BMC Bioinformatics; 2006 Apr; 7():206. PubMed ID: 16613604
[TBL] [Abstract][Full Text] [Related]
11. Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.
Pascual-García A; Abia D; Ortiz AR; Bastolla U
PLoS Comput Biol; 2009 Mar; 5(3):e1000331. PubMed ID: 19325884
[TBL] [Abstract][Full Text] [Related]
12. DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment.
Wright ES
BMC Bioinformatics; 2015 Oct; 16():322. PubMed ID: 26445311
[TBL] [Abstract][Full Text] [Related]
13. Toward high-throughput, multicriteria protein-structure comparison and analysis.
Shah AA; Folino G; Krasnogor N
IEEE Trans Nanobioscience; 2010 Jun; 9(2):144-55. PubMed ID: 20650704
[TBL] [Abstract][Full Text] [Related]
14. Protein homology detection using string alignment kernels.
Saigo H; Vert JP; Ueda N; Akutsu T
Bioinformatics; 2004 Jul; 20(11):1682-9. PubMed ID: 14988126
[TBL] [Abstract][Full Text] [Related]
15. CLUSS: clustering of protein sequences based on a new similarity measure.
Kelil A; Wang S; Brzezinski R; Fleury A
BMC Bioinformatics; 2007 Aug; 8():286. PubMed ID: 17683581
[TBL] [Abstract][Full Text] [Related]
16. Rapid similarity search of proteins using alignments of domain arrangements.
Terrapon N; Weiner J; Grath S; Moore AD; Bornberg-Bauer E
Bioinformatics; 2014 Jan; 30(2):274-81. PubMed ID: 23828785
[TBL] [Abstract][Full Text] [Related]
17. ASH structure alignment package: sensitivity and selectivity in domain classification.
Standley DM; Toh H; Nakamura H
BMC Bioinformatics; 2007 Apr; 8():116. PubMed ID: 17407606
[TBL] [Abstract][Full Text] [Related]
18. ProCKSI: a decision support system for Protein (structure) Comparison, Knowledge, Similarity and Information.
Barthel D; Hirst JD; Błazewicz J; Burke EK; Krasnogor N
BMC Bioinformatics; 2007 Oct; 8():416. PubMed ID: 17963510
[TBL] [Abstract][Full Text] [Related]
19. Computational cluster validation for microarray data analysis: experimental assessment of Clest, Consensus Clustering, Figure of Merit, Gap Statistics and Model Explorer.
Giancarlo R; Scaturro D; Utro F
BMC Bioinformatics; 2008 Oct; 9():462. PubMed ID: 18959783
[TBL] [Abstract][Full Text] [Related]
20. GLProbs: Aligning Multiple Sequences Adaptively.
Ye Y; Cheung DW; Wang Y; Yiu SM; Zhan Q; Lam TW; Ting HF
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(1):67-78. PubMed ID: 26357079
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
