These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

253 related articles for article (PubMed ID: 17644215)

  • 21. A protocol for designing siRNAs with high functionality and specificity.
    Birmingham A; Anderson E; Sullivan K; Reynolds A; Boese Q; Leake D; Karpilow J; Khvorova A
    Nat Protoc; 2007; 2(9):2068-78. PubMed ID: 17853862
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
    de Almeida RS; Keita D; Libeau G; Albina E
    Antiviral Res; 2008 Jul; 79(1):37-48. PubMed ID: 18394725
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Computational siRNA design considering alternative splicing.
    Kim YJ
    Methods Mol Biol; 2010; 623():81-92. PubMed ID: 20217545
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Selection and validation of optimal siRNA target sites for RNAi-mediated gene silencing.
    Luo Q; Kang Q; Song WX; Luu HH; Luo X; An N; Luo J; Deng ZL; Jiang W; Yin H; Chen J; Sharff KA; Tang N; Bennett E; Haydon RC; He TC
    Gene; 2007 Jun; 395(1-2):160-9. PubMed ID: 17449199
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Selecting effective siRNA sequences based on the self-organizing map and statistical techniques.
    Takasaki S; Kawamura Y; Konagaya A
    Comput Biol Chem; 2006 Jun; 30(3):169-78. PubMed ID: 16600687
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Selecting effective siRNA target sequences by using Bayes' theorem.
    Takasaki S
    Comput Biol Chem; 2009 Oct; 33(5):368-72. PubMed ID: 19682951
    [TBL] [Abstract][Full Text] [Related]  

  • 27. siVirus: web-based antiviral siRNA design software for highly divergent viral sequences.
    Naito Y; Ui-Tei K; Nishikawa T; Takebe Y; Saigo K
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W448-50. PubMed ID: 16845046
    [TBL] [Abstract][Full Text] [Related]  

  • 28. OptiRNAi, an RNAi design tool.
    Cui W; Ning J; Naik UP; Duncan MK
    Comput Methods Programs Biomed; 2004 Jul; 75(1):67-73. PubMed ID: 15158049
    [TBL] [Abstract][Full Text] [Related]  

  • 29. The effect of regions flanking target site on siRNA potency.
    Liu L; Li QZ; Lin H; Zuo YC
    Genomics; 2013 Oct; 102(4):215-22. PubMed ID: 23891614
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Mechanistic insights aid computational short interfering RNA design.
    Boese Q; Leake D; Reynolds A; Read S; Scaringe SA; Marshall WS; Khvorova A
    Methods Enzymol; 2005; 392():73-96. PubMed ID: 15644176
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Screening of siRNA target sequences by using fragmentized DNA.
    Kasim V; Taira K; Miyagishi M
    J Gene Med; 2006 Jun; 8(6):782-91. PubMed ID: 16532512
    [TBL] [Abstract][Full Text] [Related]  

  • 32. TROD: T7 RNAi Oligo Designer.
    Dudek P; Picard D
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W121-3. PubMed ID: 15215363
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A structure-activity relationship study of siRNAs with structural variations.
    Chang CI; Hong SW; Kim S; Lee DK
    Biochem Biophys Res Commun; 2007 Aug; 359(4):997-1003. PubMed ID: 17577577
    [TBL] [Abstract][Full Text] [Related]  

  • 34. In silico selection of active siRNA.
    Patzel V
    Drug Discov Today; 2007 Feb; 12(3-4):139-48. PubMed ID: 17275734
    [TBL] [Abstract][Full Text] [Related]  

  • 35. dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference.
    Naito Y; Yamada T; Matsumiya T; Ui-Tei K; Saigo K; Morishita S
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W589-91. PubMed ID: 15980542
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Guidelines for the selection of effective short-interfering RNA sequences for functional genomics.
    Ui-Tei K; Naito Y; Saigo K
    Methods Mol Biol; 2007; 361():201-16. PubMed ID: 17172713
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A comparison of siRNA efficacy predictors.
    Saetrom P; Snøve O
    Biochem Biophys Res Commun; 2004 Aug; 321(1):247-53. PubMed ID: 15358242
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A novel program to design siRNAs simultaneously effective to highly variable virus genomes.
    Lee HS; Ahn J; Jun EJ; Yang S; Joo CH; Kim YK; Lee H
    Biochem Biophys Res Commun; 2009 Jul; 384(4):431-5. PubMed ID: 19422797
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Ebbie: automated analysis and storage of small RNA cloning data using a dynamic web server.
    Ebhardt HA; Wiese KC; Unrau PJ
    BMC Bioinformatics; 2006 Apr; 7():185. PubMed ID: 16584563
    [TBL] [Abstract][Full Text] [Related]  

  • 40. MysiRNA: improving siRNA efficacy prediction using a machine-learning model combining multi-tools and whole stacking energy (ΔG).
    Mysara M; Elhefnawi M; Garibaldi JM
    J Biomed Inform; 2012 Jun; 45(3):528-34. PubMed ID: 22388012
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 13.