144 related articles for article (PubMed ID: 17660202)
1. Consensus Data Mining (CDM) Protein Secondary Structure Prediction Server: combining GOR V and Fragment Database Mining (FDM).
Cheng H; Sen TZ; Jernigan RL; Kloczkowski A
Bioinformatics; 2007 Oct; 23(19):2628-30. PubMed ID: 17660202
[TBL] [Abstract][Full Text] [Related]
2. A Consensus Data Mining secondary structure prediction by combining GOR V and Fragment Database Mining.
Sen TZ; Cheng H; Kloczkowski A; Jernigan RL
Protein Sci; 2006 Nov; 15(11):2499-506. PubMed ID: 17001039
[TBL] [Abstract][Full Text] [Related]
3. GOR V server for protein secondary structure prediction.
Sen TZ; Jernigan RL; Garnier J; Kloczkowski A
Bioinformatics; 2005 Jun; 21(11):2787-8. PubMed ID: 15797907
[TBL] [Abstract][Full Text] [Related]
4. Predicting Protein Secondary Structure Using Consensus Data Mining (CDM) Based on Empirical Statistics and Evolutionary Information.
Kandoi G; Leelananda SP; Jernigan RL; Sen TZ
Methods Mol Biol; 2017; 1484():35-44. PubMed ID: 27787818
[TBL] [Abstract][Full Text] [Related]
5. Combining the GOR V algorithm with evolutionary information for protein secondary structure prediction from amino acid sequence.
Kloczkowski A; Ting KL; Jernigan RL; Garnier J
Proteins; 2002 Nov; 49(2):154-66. PubMed ID: 12210997
[TBL] [Abstract][Full Text] [Related]
6. Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA.
Bystroff C; Shao Y
Bioinformatics; 2002; 18 Suppl 1():S54-61. PubMed ID: 12169531
[TBL] [Abstract][Full Text] [Related]
7. Porter: a new, accurate server for protein secondary structure prediction.
Pollastri G; McLysaght A
Bioinformatics; 2005 Apr; 21(8):1719-20. PubMed ID: 15585524
[TBL] [Abstract][Full Text] [Related]
8. Domain-based small molecule binding site annotation.
Snyder KA; Feldman HJ; Dumontier M; Salama JJ; Hogue CW
BMC Bioinformatics; 2006 Mar; 7():152. PubMed ID: 16545112
[TBL] [Abstract][Full Text] [Related]
9. PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics.
von Grotthuss M; Plewczynski D; Ginalski K; Rychlewski L; Shakhnovich EI
BMC Bioinformatics; 2006 Feb; 7():53. PubMed ID: 16460560
[TBL] [Abstract][Full Text] [Related]
10. Three-dimensional shape-structure comparison method for protein classification.
Daras P; Zarpalas D; Axenopoulos A; Tzovaras D; Strintzis MG
IEEE/ACM Trans Comput Biol Bioinform; 2006; 3(3):193-207. PubMed ID: 17048458
[TBL] [Abstract][Full Text] [Related]
11. The GOR Method of Protein Secondary Structure Prediction and Its Application as a Protein Aggregation Prediction Tool.
Kouza M; Faraggi E; Kolinski A; Kloczkowski A
Methods Mol Biol; 2017; 1484():7-24. PubMed ID: 27787816
[TBL] [Abstract][Full Text] [Related]
12. SCOPEC: a database of protein catalytic domains.
George RA; Spriggs RV; Thornton JM; Al-Lazikani B; Swindells MB
Bioinformatics; 2004 Aug; 20 Suppl 1():i130-6. PubMed ID: 15262791
[TBL] [Abstract][Full Text] [Related]
13. The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.
Fischer D; Paś J; Rychlewski L
Bioinformatics; 2004 Oct; 20(15):2482-4. PubMed ID: 15073011
[TBL] [Abstract][Full Text] [Related]
14. ProtBuD: a database of biological unit structures of protein families and superfamilies.
Xu Q; Canutescu A; Obradovic Z; Dunbrack RL
Bioinformatics; 2006 Dec; 22(23):2876-82. PubMed ID: 17018535
[TBL] [Abstract][Full Text] [Related]
15. A dynamic Bayesian network approach to protein secondary structure prediction.
Yao XQ; Zhu H; She ZS
BMC Bioinformatics; 2008 Jan; 9():49. PubMed ID: 18218144
[TBL] [Abstract][Full Text] [Related]
16. Using Dali for structural comparison of proteins.
Holm L; Kääriäinen S; Wilton C; Plewczynski D
Curr Protoc Bioinformatics; 2006 Jul; Chapter 5():Unit 5.5. PubMed ID: 18428766
[TBL] [Abstract][Full Text] [Related]
17. Sequence based residue depth prediction using evolutionary information and predicted secondary structure.
Zhang H; Zhang T; Chen K; Shen S; Ruan J; Kurgan L
BMC Bioinformatics; 2008 Sep; 9():388. PubMed ID: 18803867
[TBL] [Abstract][Full Text] [Related]
18. A neural network method for prediction of beta-turn types in proteins using evolutionary information.
Kaur H; Raghava GP
Bioinformatics; 2004 Nov; 20(16):2751-8. PubMed ID: 15145798
[TBL] [Abstract][Full Text] [Related]
19. PFRES: protein fold classification by using evolutionary information and predicted secondary structure.
Chen K; Kurgan L
Bioinformatics; 2007 Nov; 23(21):2843-50. PubMed ID: 17942446
[TBL] [Abstract][Full Text] [Related]
20. A new representation for protein secondary structure prediction based on frequent patterns.
Birzele F; Kramer S
Bioinformatics; 2006 Nov; 22(21):2628-34. PubMed ID: 16940325
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
