527 related articles for article (PubMed ID: 17671977)
1. Implicit flexibility in protein docking: cross-docking and local refinement.
Król M; Chaleil RA; Tournier AL; Bates PA
Proteins; 2007 Dec; 69(4):750-7. PubMed ID: 17671977
[TBL] [Abstract][Full Text] [Related]
2. Protein-protein docking in CAPRI using ATTRACT to account for global and local flexibility.
May A; Zacharias M
Proteins; 2007 Dec; 69(4):774-80. PubMed ID: 17803217
[TBL] [Abstract][Full Text] [Related]
3. Docking and scoring protein complexes: CAPRI 3rd Edition.
Lensink MF; Méndez R; Wodak SJ
Proteins; 2007 Dec; 69(4):704-18. PubMed ID: 17918726
[TBL] [Abstract][Full Text] [Related]
4. A holistic approach to protein docking.
Qin S; Zhou HX
Proteins; 2007 Dec; 69(4):743-9. PubMed ID: 17803232
[TBL] [Abstract][Full Text] [Related]
5. Improving CAPRI predictions: optimized desolvation for rigid-body docking.
Fernández-Recio J; Abagyan R; Totrov M
Proteins; 2005 Aug; 60(2):308-13. PubMed ID: 15981266
[TBL] [Abstract][Full Text] [Related]
6. Prediction and scoring of docking poses with pyDock.
Grosdidier S; Pons C; Solernou A; Fernández-Recio J
Proteins; 2007 Dec; 69(4):852-8. PubMed ID: 17876821
[TBL] [Abstract][Full Text] [Related]
7. The performance of ZDOCK and ZRANK in rounds 6-11 of CAPRI.
Wiehe K; Pierce B; Tong WW; Hwang H; Mintseris J; Weng Z
Proteins; 2007 Dec; 69(4):719-25. PubMed ID: 17803212
[TBL] [Abstract][Full Text] [Related]
8. Progress in protein-protein docking: atomic resolution predictions in the CAPRI experiment using RosettaDock with an improved treatment of side-chain flexibility.
Schueler-Furman O; Wang C; Baker D
Proteins; 2005 Aug; 60(2):187-94. PubMed ID: 15981249
[TBL] [Abstract][Full Text] [Related]
9. RosettaDock in CAPRI rounds 6-12.
Wang C; Schueler-Furman O; Andre I; London N; Fleishman SJ; Bradley P; Qian B; Baker D
Proteins; 2007 Dec; 69(4):758-63. PubMed ID: 17671979
[TBL] [Abstract][Full Text] [Related]
10. Docking essential dynamics eigenstructures.
Mustard D; Ritchie DW
Proteins; 2005 Aug; 60(2):269-74. PubMed ID: 15981272
[TBL] [Abstract][Full Text] [Related]
11. Protein-protein docking: progress in CAPRI rounds 6-12 using a combination of methods: the introduction of steered solvated molecular dynamics.
Heifetz A; Pal S; Smith GR
Proteins; 2007 Dec; 69(4):816-22. PubMed ID: 17803214
[TBL] [Abstract][Full Text] [Related]
12. ClusPro: performance in CAPRI rounds 6-11 and the new server.
Comeau SR; Kozakov D; Brenke R; Shen Y; Beglov D; Vajda S
Proteins; 2007 Dec; 69(4):781-5. PubMed ID: 17876812
[TBL] [Abstract][Full Text] [Related]
13. Incorporation of flexibility into rigid-body docking: applications in rounds 3-5 of CAPRI.
Smith GR; Fitzjohn PW; Page CS; Bates PA
Proteins; 2005 Aug; 60(2):263-8. PubMed ID: 15981258
[TBL] [Abstract][Full Text] [Related]
14. A filter enhanced sampling and combinatorial scoring study for protein docking in CAPRI.
Gong XQ; Chang S; Zhang QH; Li CH; Shen LZ; Ma XH; Wang MH; Liu B; He HQ; Chen WZ; Wang CX
Proteins; 2007 Dec; 69(4):859-65. PubMed ID: 17803223
[TBL] [Abstract][Full Text] [Related]
15. ATTRACT: protein-protein docking in CAPRI using a reduced protein model.
Zacharias M
Proteins; 2005 Aug; 60(2):252-6. PubMed ID: 15981270
[TBL] [Abstract][Full Text] [Related]
16. Assessing the energy landscape of CAPRI targets by FunHunt.
London N; Schueler-Furman O
Proteins; 2007 Dec; 69(4):809-15. PubMed ID: 17803233
[TBL] [Abstract][Full Text] [Related]
17. The targets of CAPRI rounds 6-12.
Janin J
Proteins; 2007 Dec; 69(4):699-703. PubMed ID: 17671980
[TBL] [Abstract][Full Text] [Related]
18. HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets.
de Vries SJ; van Dijk AD; Krzeminski M; van Dijk M; Thureau A; Hsu V; Wassenaar T; Bonvin AM
Proteins; 2007 Dec; 69(4):726-33. PubMed ID: 17803234
[TBL] [Abstract][Full Text] [Related]
19. Approaching the CAPRI challenge with an efficient geometry-based docking.
Inbar Y; Schneidman-Duhovny D; Halperin I; Oron A; Nussinov R; Wolfson HJ
Proteins; 2005 Aug; 60(2):217-23. PubMed ID: 15981251
[TBL] [Abstract][Full Text] [Related]
20. Classification of protein complexes based on docking difficulty.
Vajda S
Proteins; 2005 Aug; 60(2):176-80. PubMed ID: 15981248
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]