584 related articles for article (PubMed ID: 17686169)
1. Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.
Cvijović M; Dalevi D; Bilsland E; Kemp GJ; Sunnerhagen P
BMC Bioinformatics; 2007 Aug; 8():295. PubMed ID: 17686169
[TBL] [Abstract][Full Text] [Related]
2. Dual modes of natural selection on upstream open reading frames.
Neafsey DE; Galagan JE
Mol Biol Evol; 2007 Aug; 24(8):1744-51. PubMed ID: 17494029
[TBL] [Abstract][Full Text] [Related]
3. A quantitative model for translational control of the GCN4 gene of Saccharomyces cerevisiae.
Abastado JP; Miller PF; Hinnebusch AG
New Biol; 1991 May; 3(5):511-24. PubMed ID: 1883814
[TBL] [Abstract][Full Text] [Related]
4. Identification and characterization of upstream open reading frames (uORF) in the 5' untranslated regions (UTR) of genes in Saccharomyces cerevisiae.
Zhang Z; Dietrich FS
Curr Genet; 2005 Aug; 48(2):77-87. PubMed ID: 16012843
[TBL] [Abstract][Full Text] [Related]
5. Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae.
Hughes JD; Estep PW; Tavazoie S; Church GM
J Mol Biol; 2000 Mar; 296(5):1205-14. PubMed ID: 10698627
[TBL] [Abstract][Full Text] [Related]
6. Systematic identification, classification, and characterization of the open reading frames which encode novel helicase-related proteins in Saccharomyces cerevisiae by gene disruption and Northern analysis.
Shiratori A; Shibata T; Arisawa M; Hanaoka F; Murakami Y; Eki T
Yeast; 1999 Feb; 15(3):219-53. PubMed ID: 10077188
[TBL] [Abstract][Full Text] [Related]
7. Suppressors of translation initiation defect in hem12 locus of Saccharomyces cerevisiae.
Góra M; Pluta K; Chelstowska A; Zoładek T
Acta Biochim Pol; 2000; 47(1):181-90. PubMed ID: 10961692
[TBL] [Abstract][Full Text] [Related]
8. In-depth analysis of cis-determinants that either promote or inhibit reinitiation on GCN4 mRNA after translation of its four short uORFs.
Gunišová S; Beznosková P; Mohammad MP; Vlčková V; Valášek LS
RNA; 2016 Apr; 22(4):542-58. PubMed ID: 26822200
[TBL] [Abstract][Full Text] [Related]
9. BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.
Takahashi H; Takahashi A; Naito S; Onouchi H
Bioinformatics; 2012 Sep; 28(17):2231-41. PubMed ID: 22618534
[TBL] [Abstract][Full Text] [Related]
10. Impacts of uORF codon identity and position on translation regulation.
Lin Y; May GE; Kready H; Nazzaro L; Mao M; Spealman P; Creeger Y; McManus CJ
Nucleic Acids Res; 2019 Sep; 47(17):9358-9367. PubMed ID: 31392980
[TBL] [Abstract][Full Text] [Related]
11. Mining putative regulatory elements in promoter regions of Saccharomyces cerevisiae.
Horng JT; Huang HD; Huang SL; Yan UC; Chang YC
In Silico Biol; 2002; 2(3):263-73. PubMed ID: 12542412
[TBL] [Abstract][Full Text] [Related]
12. Evidence for conservation and selection of upstream open reading frames suggests probable encoding of bioactive peptides.
Crowe ML; Wang XQ; Rothnagel JA
BMC Genomics; 2006 Jan; 7():16. PubMed ID: 16438715
[TBL] [Abstract][Full Text] [Related]
13. Inhibition of vasopressin V1b receptor translation by upstream open reading frames in the 5'-untranslated region.
Rabadan-Diehl C; Martínez A; Volpi S; Subburaju S; Aguilera G
J Neuroendocrinol; 2007 Apr; 19(4):309-19. PubMed ID: 17355321
[TBL] [Abstract][Full Text] [Related]
14. The efficiency of translation termination is determined by a synergistic interplay between upstream and downstream sequences in Saccharomyces cerevisiae.
Bonetti B; Fu L; Moon J; Bedwell DM
J Mol Biol; 1995 Aug; 251(3):334-45. PubMed ID: 7650736
[TBL] [Abstract][Full Text] [Related]
15. Paleogenomics or the search for remnant duplicated copies of the yeast DUP240 gene family in intergenic areas.
Wirth B; Louis VL; Potier S; Souciet JL; Despons L
Mol Biol Evol; 2005 Sep; 22(9):1764-71. PubMed ID: 15917500
[TBL] [Abstract][Full Text] [Related]
16. Evolutionary roles of upstream open reading frames in mediating gene regulation in fungi.
Hood HM; Neafsey DE; Galagan J; Sachs MS
Annu Rev Microbiol; 2009; 63():385-409. PubMed ID: 19514854
[TBL] [Abstract][Full Text] [Related]
17. Evolutionary simulations to detect functional lineage-specific genes.
Dupanloup I; Kaessmann H
Bioinformatics; 2006 Aug; 22(15):1815-22. PubMed ID: 16766551
[TBL] [Abstract][Full Text] [Related]
18. Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels.
Hiragori Y; Takahashi H; Karino T; Kaido A; Hayashi N; Sasaki S; Nakao K; Motomura T; Yamashita Y; Naito S; Onouchi H
Plant Mol Biol; 2023 Jan; 111(1-2):37-55. PubMed ID: 36044152
[TBL] [Abstract][Full Text] [Related]
19. The DNA sequence of cosmid 14-13b from chromosome XIV of Saccharomyces cerevisiae reveals an unusually high number of overlapping open reading frames.
De Antoni A; D'Angelo M; Dal Pero F; Sartorello F; Pandolfo D; Pallavicini A; Lanfranchi G; Valle G
Yeast; 1997 Mar; 13(3):261-6. PubMed ID: 9090055
[TBL] [Abstract][Full Text] [Related]
20. Genomics: Yeast rises again.
Salzberg SL
Nature; 2003 May; 423(6937):233-4. PubMed ID: 12748625
[No Abstract] [Full Text] [Related]
[Next] [New Search]