BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

317 related articles for article (PubMed ID: 17708682)

  • 1. Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome.
    Xi H; Shulha HP; Lin JM; Vales TR; Fu Y; Bodine DM; McKay RD; Chenoweth JG; Tesar PJ; Furey TS; Ren B; Weng Z; Crawford GE
    PLoS Genet; 2007 Aug; 3(8):e136. PubMed ID: 17708682
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS).
    Crawford GE; Holt IE; Whittle J; Webb BD; Tai D; Davis S; Margulies EH; Chen Y; Bernat JA; Ginsburg D; Zhou D; Luo S; Vasicek TJ; Daly MJ; Wolfsberg TG; Collins FS
    Genome Res; 2006 Jan; 16(1):123-31. PubMed ID: 16344561
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.
    Song L; Zhang Z; Grasfeder LL; Boyle AP; Giresi PG; Lee BK; Sheffield NC; Gräf S; Huss M; Keefe D; Liu Z; London D; McDaniell RM; Shibata Y; Showers KA; Simon JM; Vales T; Wang T; Winter D; Zhang Z; Clarke ND; Birney E; Iyer VR; Crawford GE; Lieb JD; Furey TS
    Genome Res; 2011 Oct; 21(10):1757-67. PubMed ID: 21750106
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CTCF-dependent enhancer blockers at the upstream region of the chicken alpha-globin gene domain.
    Valadez-Graham V; Razin SV; Recillas-Targa F
    Nucleic Acids Res; 2004; 32(4):1354-62. PubMed ID: 14981153
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genome-wide identification of DNaseI hypersensitive sites using active chromatin sequence libraries.
    Sabo PJ; Humbert R; Hawrylycz M; Wallace JC; Dorschner MO; McArthur M; Stamatoyannopoulos JA
    Proc Natl Acad Sci U S A; 2004 Mar; 101(13):4537-42. PubMed ID: 15070753
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Genome-wide analysis of the relationships between DNaseI HS, histone modifications and gene expression reveals distinct modes of chromatin domains.
    Shu W; Chen H; Bo X; Wang S
    Nucleic Acids Res; 2011 Sep; 39(17):7428-43. PubMed ID: 21685456
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites.
    Follows GA; Dhami P; Göttgens B; Bruce AW; Campbell PJ; Dillon SC; Smith AM; Koch C; Donaldson IJ; Scott MA; Dunham I; Janes ME; Vetrie D; Green AR
    Genome Res; 2006 Oct; 16(10):1310-9. PubMed ID: 16963707
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Enhancer-blocking activity is associated with hypersensitive site V sequences in the human growth hormone locus control region.
    Jin Y; Oomah K; Cattini PA
    DNA Cell Biol; 2011 Dec; 30(12):995-1005. PubMed ID: 21711161
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mapping regulatory elements by DNaseI hypersensitivity chip (DNase-Chip).
    Shibata Y; Crawford GE
    Methods Mol Biol; 2009; 556():177-90. PubMed ID: 19488879
    [TBL] [Abstract][Full Text] [Related]  

  • 10. An open chromatin structure in a liver-specific enhancer that confers high level expression to human apolipoprotein b transgenes in mice.
    Levy-Wilson B; Paulweber B; Antes TJ; Goodart SA; Lee SY
    Mol Cell Biol Res Commun; 2000 Oct; 4(4):206-11. PubMed ID: 11409913
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Defining the multivalent functions of CTCF from chromatin state and three-dimensional chromatin interactions.
    Lu Y; Shan G; Xue J; Chen C; Zhang C
    Nucleic Acids Res; 2016 Jul; 44(13):6200-12. PubMed ID: 27067545
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Characterization of chromatin structure and enhancer elements for murine recombination activating gene-2.
    Wei XC; Kishi H; Jin ZX; Zhao WP; Kondo S; Matsuda T; Saito S; Muraguchi A
    J Immunol; 2002 Jul; 169(2):873-81. PubMed ID: 12097391
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A chromatin insulator-like element in the herpes simplex virus type 1 latency-associated transcript region binds CCCTC-binding factor and displays enhancer-blocking and silencing activities.
    Amelio AL; McAnany PK; Bloom DC
    J Virol; 2006 Mar; 80(5):2358-68. PubMed ID: 16474142
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites.
    Xie X; Mikkelsen TS; Gnirke A; Lindblad-Toh K; Kellis M; Lander ES
    Proc Natl Acad Sci U S A; 2007 Apr; 104(17):7145-50. PubMed ID: 17442748
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mapping DNase-I hypersensitive sites on human isochores.
    Di Filippo M; Bernardi G
    Gene; 2008 Aug; 419(1-2):62-5. PubMed ID: 18436395
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comprehensive identification and annotation of cell type-specific and ubiquitous CTCF-binding sites in the human genome.
    Chen H; Tian Y; Shu W; Bo X; Wang S
    PLoS One; 2012; 7(7):e41374. PubMed ID: 22829947
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Chromatin structure of the bovine Cyp19 promoter 1.1. DNaseI hypersensitive sites and DNA hypomethylation correlate with placental expression.
    Fürbass R; Said HM; Schwerin M; Vanselow J
    Eur J Biochem; 2001 Mar; 268(5):1222-7. PubMed ID: 11231273
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An androgen response element in a far upstream enhancer region is essential for high, androgen-regulated activity of the prostate-specific antigen promoter.
    Cleutjens KB; van der Korput HA; van Eekelen CC; van Rooij HC; Faber PW; Trapman J
    Mol Endocrinol; 1997 Feb; 11(2):148-61. PubMed ID: 9013762
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CTCF-dependent chromatin insulator is linked to epigenetic remodeling.
    Ishihara K; Oshimura M; Nakao M
    Mol Cell; 2006 Sep; 23(5):733-42. PubMed ID: 16949368
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome.
    Kim TH; Abdullaev ZK; Smith AD; Ching KA; Loukinov DI; Green RD; Zhang MQ; Lobanenkov VV; Ren B
    Cell; 2007 Mar; 128(6):1231-45. PubMed ID: 17382889
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.