These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

171 related articles for article (PubMed ID: 17822394)

  • 1. Integration of CellDesigner and SABIO-RK.
    Funahashi A; Jouraku A; Matsuoka Y; Kitano H
    In Silico Biol; 2007; 7(2 Suppl):S81-90. PubMed ID: 17822394
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PathCase: pathways database system.
    Elliott B; Kirac M; Cakmak A; Yavas G; Mayes S; Cheng E; Wang Y; Gupta C; Ozsoyoglu G; Meral Ozsoyoglu Z
    Bioinformatics; 2008 Nov; 24(21):2526-33. PubMed ID: 18728044
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis.
    Pitkänen E; Akerlund A; Rantanen A; Jouhten P; Ukkonen E
    J Integr Bioinform; 2008 Aug; 5(2):. PubMed ID: 20134058
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ConsensusPathDB--a database for integrating human functional interaction networks.
    Kamburov A; Wierling C; Lehrach H; Herwig R
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D623-8. PubMed ID: 18940869
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SABIO-RK: an updated resource for manually curated biochemical reaction kinetics.
    Wittig U; Rey M; Weidemann A; Kania R; Müller W
    Nucleic Acids Res; 2018 Jan; 46(D1):D656-D660. PubMed ID: 29092055
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SYSTOMONAS--an integrated database for systems biology analysis of Pseudomonas.
    Choi C; Münch R; Leupold S; Klein J; Siegel I; Thielen B; Benkert B; Kucklick M; Schobert M; Barthelmes J; Ebeling C; Haddad I; Scheer M; Grote A; Hiller K; Bunk B; Schreiber K; Retter I; Schomburg D; Jahn D
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D533-7. PubMed ID: 17202169
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Using process diagrams for the graphical representation of biological networks.
    Kitano H; Funahashi A; Matsuoka Y; Oda K
    Nat Biotechnol; 2005 Aug; 23(8):961-6. PubMed ID: 16082367
    [TBL] [Abstract][Full Text] [Related]  

  • 8. METANNOGEN: compiling features of biochemical reactions needed for the reconstruction of metabolic networks.
    Gille C; Hoffmann S; Holzhütter HG
    BMC Syst Biol; 2007 Jan; 1():5. PubMed ID: 17408512
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SABIO-RK--database for biochemical reaction kinetics.
    Wittig U; Kania R; Golebiewski M; Rey M; Shi L; Jong L; Algaa E; Weidemann A; Sauer-Danzwith H; Mir S; Krebs O; Bittkowski M; Wetsch E; Rojas I; Müller W
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D790-6. PubMed ID: 22102587
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks.
    Machné R; Finney A; Müller S; Lu J; Widder S; Flamm C
    Bioinformatics; 2006 Jun; 22(11):1406-7. PubMed ID: 16527832
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks.
    Dräger A; Hassis N; Supper J; Schröder A; Zell A
    BMC Syst Biol; 2008 Apr; 2():39. PubMed ID: 18447902
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PathwayAccess: CellDesigner plugins for pathway databases.
    Van Hemert JL; Dickerson JA
    Bioinformatics; 2010 Sep; 26(18):2345-6. PubMed ID: 20647521
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks.
    Schneider J; Vorhölter FJ; Trost E; Blom J; Musa YR; Neuweger H; Niehaus K; Schatschneider S; Tauch A; Goesmann A
    Genet Mol Res; 2010 Aug; 9(3):1660-72. PubMed ID: 20799163
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CoryneRegNet 3.0--an interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli.
    Baumbach J; Wittkop T; Rademacher K; Rahmann S; Brinkrolf K; Tauch A
    J Biotechnol; 2007 Apr; 129(2):279-89. PubMed ID: 17229482
    [TBL] [Abstract][Full Text] [Related]  

  • 15. BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems.
    Le Novère N; Bornstein B; Broicher A; Courtot M; Donizelli M; Dharuri H; Li L; Sauro H; Schilstra M; Shapiro B; Snoep JL; Hucka M
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D689-91. PubMed ID: 16381960
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CSML2SBML: a novel tool for converting quantitative biological pathway models from CSML into SBML.
    Li C; Nagasaki M; Ikeda E; Sekiya Y; Miyano S
    Biosystems; 2014 Jul; 121():22-8. PubMed ID: 24881961
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Biochemical modeling with Systems Biology Graphical Notation.
    Jansson A; Jirstrand M
    Drug Discov Today; 2010 May; 15(9-10):365-70. PubMed ID: 20211756
    [TBL] [Abstract][Full Text] [Related]  

  • 18. KiPar, a tool for systematic information retrieval regarding parameters for kinetic modelling of yeast metabolic pathways.
    Spasic I; Simeonidis E; Messiha HL; Paton NW; Kell DB
    Bioinformatics; 2009 Jun; 25(11):1404-11. PubMed ID: 19336445
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CellPublisher: a web platform for the intuitive visualization and sharing of metabolic, signalling and regulatory pathways.
    Flórez LA; Lammers CR; Michna R; Stülke J
    Bioinformatics; 2010 Dec; 26(23):2997-9. PubMed ID: 20947526
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SMART 6: recent updates and new developments.
    Letunic I; Doerks T; Bork P
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D229-32. PubMed ID: 18978020
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.