403 related articles for article (PubMed ID: 17875690)
1. Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing.
Taylor KH; Kramer RS; Davis JW; Guo J; Duff DJ; Xu D; Caldwell CW; Shi H
Cancer Res; 2007 Sep; 67(18):8511-8. PubMed ID: 17875690
[TBL] [Abstract][Full Text] [Related]
2. Quantitative and multiplexed DNA methylation analysis using long-read single-molecule real-time bisulfite sequencing (SMRT-BS).
Yang Y; Sebra R; Pullman BS; Qiao W; Peter I; Desnick RJ; Geyer CR; DeCoteau JF; Scott SA
BMC Genomics; 2015 May; 16(1):350. PubMed ID: 25943404
[TBL] [Abstract][Full Text] [Related]
3. Locally disordered methylation forms the basis of intratumor methylome variation in chronic lymphocytic leukemia.
Landau DA; Clement K; Ziller MJ; Boyle P; Fan J; Gu H; Stevenson K; Sougnez C; Wang L; Li S; Kotliar D; Zhang W; Ghandi M; Garraway L; Fernandes SM; Livak KJ; Gabriel S; Gnirke A; Lander ES; Brown JR; Neuberg D; Kharchenko PV; Hacohen N; Getz G; Meissner A; Wu CJ
Cancer Cell; 2014 Dec; 26(6):813-825. PubMed ID: 25490447
[TBL] [Abstract][Full Text] [Related]
4. DNA Methylation Profiling Using Long-Read Single Molecule Real-Time Bisulfite Sequencing (SMRT-BS).
Yang Y; Scott SA
Methods Mol Biol; 2017; 1654():125-134. PubMed ID: 28986786
[TBL] [Abstract][Full Text] [Related]
5. Integrated methylome and transcriptome analysis reveals novel regulatory elements in pediatric acute lymphoblastic leukemia.
Almamun M; Levinson BT; van Swaay AC; Johnson NT; McKay SD; Arthur GL; Davis JW; Taylor KH
Epigenetics; 2015; 10(9):882-90. PubMed ID: 26308964
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing.
Choi JH; Li Y; Guo J; Pei L; Rauch TA; Kramer RS; Macmil SL; Wiley GB; Bennett LB; Schnabel JL; Taylor KH; Kim S; Xu D; Sreekumar A; Pfeifer GP; Roe BA; Caldwell CW; Bhalla KN; Shi H
PLoS One; 2010 Sep; 5(9):. PubMed ID: 20927367
[TBL] [Abstract][Full Text] [Related]
7. Discovery of novel epigenetic markers in non-Hodgkin's lymphoma.
Shi H; Guo J; Duff DJ; Rahmatpanah F; Chitima-Matsiga R; Al-Kuhlani M; Taylor KH; Sjahputera O; Andreski M; Wooldridge JE; Caldwell CW
Carcinogenesis; 2007 Jan; 28(1):60-70. PubMed ID: 16774933
[TBL] [Abstract][Full Text] [Related]
8. Mantle cell lymphoma displays a homogenous methylation profile: a comparative analysis with chronic lymphocytic leukemia.
Halldórsdóttir AM; Kanduri M; Marincevic M; Mansouri L; Isaksson A; Göransson H; Axelsson T; Agarwal P; Jernberg-Wiklund H; Stamatopoulos K; Sander B; Ehrencrona H; Rosenquist R
Am J Hematol; 2012 Apr; 87(4):361-7. PubMed ID: 22374828
[TBL] [Abstract][Full Text] [Related]
9. DNA methylome analysis of acute lymphoblastic leukemia cells reveals stochastic de novo DNA methylation in CpG islands.
Wahlberg P; Lundmark A; Nordlund J; Busche S; Raine A; Tandre K; Rönnblom L; Sinnett D; Forestier E; Pastinen T; Lönnerholm G; Syvänen AC
Epigenomics; 2016 Oct; 8(10):1367-1387. PubMed ID: 27552300
[TBL] [Abstract][Full Text] [Related]
10. High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.
Hodges E; Smith AD; Kendall J; Xuan Z; Ravi K; Rooks M; Zhang MQ; Ye K; Bhattacharjee A; Brizuela L; McCombie WR; Wigler M; Hannon GJ; Hicks JB
Genome Res; 2009 Sep; 19(9):1593-605. PubMed ID: 19581485
[TBL] [Abstract][Full Text] [Related]
11. Global DNA methylation profiling reveals new insights into epigenetically deregulated protein coding and long noncoding RNAs in CLL.
Subhash S; Andersson PO; Kosalai ST; Kanduri C; Kanduri M
Clin Epigenetics; 2016; 8():106. PubMed ID: 27777635
[TBL] [Abstract][Full Text] [Related]
12. Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers.
Pabinger S; Ernst K; Pulverer W; Kallmeyer R; Valdes AM; Metrustry S; Katic D; Nuzzo A; Kriegner A; Vierlinger K; Weinhaeusel A
PLoS One; 2016; 11(7):e0160227. PubMed ID: 27467908
[TBL] [Abstract][Full Text] [Related]
13. An integrative approach for efficient analysis of whole genome bisulfite sequencing data.
Lee JH; Park SJ; Kenta N
BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S14. PubMed ID: 26680746
[TBL] [Abstract][Full Text] [Related]
14. DNA methylome profiling at single-base resolution through bisulfite sequencing of 5mC-immunoprecipitated DNA.
Jia Z; Shi Y; Zhang L; Ren Y; Wang T; Xing L; Zhang B; Gao G; Bu R
BMC Biotechnol; 2018 Feb; 18(1):7. PubMed ID: 29409498
[TBL] [Abstract][Full Text] [Related]
15. Frequent epigenetic inactivation of the SLIT2 gene in chronic and acute lymphocytic leukemia.
Dunwell TL; Dickinson RE; Stankovic T; Dallol A; Weston V; Austen B; Catchpoole D; Maher ER; Latif F
Epigenetics; 2009 May; 4(4):265-9. PubMed ID: 19550140
[TBL] [Abstract][Full Text] [Related]
16. Uncovering the DNA methylome in chronic lymphocytic leukemia.
Cahill N; Rosenquist R
Epigenetics; 2013 Feb; 8(2):138-48. PubMed ID: 23321535
[TBL] [Abstract][Full Text] [Related]
17. Bisulfite Patch PCR enables multiplexed sequencing of promoter methylation across cancer samples.
Varley KE; Mitra RD
Genome Res; 2010 Sep; 20(9):1279-87. PubMed ID: 20627893
[TBL] [Abstract][Full Text] [Related]
18. DNA methylation of multiple promoter-associated CpG islands in adult acute lymphocytic leukemia.
Garcia-Manero G; Daniel J; Smith TL; Kornblau SM; Lee MS; Kantarjian HM; Issa JP
Clin Cancer Res; 2002 Jul; 8(7):2217-24. PubMed ID: 12114423
[TBL] [Abstract][Full Text] [Related]
19. Preparation of genome-wide DNA fragment libraries using bisulfite in polyacrylamide gel electrophoresis slices with formamide denaturation and quality control for massively parallel sequencing by oligonucleotide ligation and detection.
Ranade SS; Chung CB; Zon G; Boyd VL
Anal Biochem; 2009 Jul; 390(2):126-35. PubMed ID: 19379703
[TBL] [Abstract][Full Text] [Related]
20. Differential DNA methylation of gene promoters in small B-cell lymphomas.
Guo J; Burger M; Nimmrich I; Maier S; Becker E; Genc B; Duff D; Rahmatpanah F; Chitma-Matsiga R; Shi H; Berlin K; Huang TH; Caldwell CW
Am J Clin Pathol; 2005 Sep; 124(3):430-9. PubMed ID: 16191512
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]