These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

149 related articles for article (PubMed ID: 17880744)

  • 21. Shape based indexing for faster search of RNA family databases.
    Janssen S; Reeder J; Giegerich R
    BMC Bioinformatics; 2008 Feb; 9():131. PubMed ID: 18312625
    [TBL] [Abstract][Full Text] [Related]  

  • 22. sensaas: Shape-based Alignment by Registration of Colored Point-based Surfaces.
    Douguet D; Payan F
    Mol Inform; 2020 Aug; 39(8):e2000081. PubMed ID: 32573978
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Shape-based virtual screening with volumetric aligned molecular shapes.
    Koes DR; Camacho CJ
    J Comput Chem; 2014 Sep; 35(25):1824-34. PubMed ID: 25049193
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Similarity Downselection: Finding the
    Nielson FF; Kay B; Young SJ; Colby SM; Renslow RS; Metz TO
    Metabolites; 2023 Jan; 13(1):. PubMed ID: 36677030
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Indexing Ultrafast Shape-Based Descriptors in MongoDB to Identify TLR4 Pathway Agonists.
    Polyakov VR; Alexandrov V; Maderna A; Bajjuri K; Li X; Zhou S
    J Chem Inf Model; 2022 May; 62(10):2446-2455. PubMed ID: 35522137
    [TBL] [Abstract][Full Text] [Related]  

  • 26. GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity.
    Malod-Dognin N; Pržulj N
    Bioinformatics; 2014 May; 30(9):1259-65. PubMed ID: 24443377
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Scope of 3D Shape-Based Approaches in Predicting the Macromolecular Targets of Structurally Complex Small Molecules Including Natural Products and Macrocyclic Ligands.
    Chen Y; Mathai N; Kirchmair J
    J Chem Inf Model; 2020 Jun; 60(6):2858-2875. PubMed ID: 32368908
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Protein Construction-Based Data Partitioning Scheme for Alignment of Protein Macromolecular Structures Through Distributed Querying in Federated Databases.
    Mrozek D; Kwiendacz J; Malysiak-Mrozek B
    IEEE Trans Nanobioscience; 2020 Jan; 19(1):102-116. PubMed ID: 31329125
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Three dimensional shape comparison of flexible proteins using the local-diameter descriptor.
    Fang Y; Liu YS; Ramani K
    BMC Struct Biol; 2009 May; 9():29. PubMed ID: 19435524
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Oriented substituent pharmacophore PRopErtY space (OSPPREYS): a substituent-based calculation that describes combinatorial library products better than the corresponding product-based calculation.
    Martin EJ; Hoeffel TJ
    J Mol Graph Model; 2000; 18(4-5):383-403. PubMed ID: 11143557
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Representing and comparing protein folds and fold families using three-dimensional shape-density representations.
    Mavridis L; Ghoorah AW; Venkatraman V; Ritchie DW
    Proteins; 2012 Feb; 80(2):530-45. PubMed ID: 22081520
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
    Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
    Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Database similarity searches.
    Plewniak F
    Methods Mol Biol; 2008; 484():361-78. PubMed ID: 18592192
    [TBL] [Abstract][Full Text] [Related]  

  • 34. SABRE: ligand/structure-based virtual screening approach using consensus molecular-shape pattern recognition.
    Wei NN; Hamza A
    J Chem Inf Model; 2014 Jan; 54(1):338-46. PubMed ID: 24328054
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Dynamic clustering threshold reduces conformer ensemble size while maintaining a biologically relevant ensemble.
    Yongye AB; Bender A; Martínez-Mayorga K
    J Comput Aided Mol Des; 2010 Aug; 24(8):675-86. PubMed ID: 20499135
    [TBL] [Abstract][Full Text] [Related]  

  • 36. BetaSearch: a new method for querying β-residue motifs.
    Ho HK; Gange G; Kuiper MJ; Ramamohanarao K
    BMC Res Notes; 2012 Jul; 5():391. PubMed ID: 22839199
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Avalanche for shape and feature-based virtual screening with 3D alignment.
    Diller DJ; Connell ND; Welsh WJ
    J Comput Aided Mol Des; 2015 Nov; 29(11):1015-24. PubMed ID: 26458937
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Parallel implementation of 3D protein structure similarity searches using a GPU and the CUDA.
    Mrozek D; Brożek M; Małysiak-Mrozek B
    J Mol Model; 2014 Feb; 20(2):2067. PubMed ID: 24481593
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Flexible alignment of small molecules using the penalty method.
    Shin W; Hyun SA; Chae CH; Chon JK
    J Chem Inf Model; 2009 Aug; 49(8):1879-88. PubMed ID: 19645428
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Similarity Search of Flexible 3D Molecules Combining Local and Global Shape Descriptors.
    Axenopoulos A; Rafailidis D; Papadopoulos G; Houstis EN; Daras P
    IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(5):954-970. PubMed ID: 26561479
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.