303 related articles for article (PubMed ID: 17881821)
1. Structure of the nondiscriminating aspartyl-tRNA synthetase from the crenarchaeon Sulfolobus tokodaii strain 7 reveals the recognition mechanism for two different tRNA anticodons.
Sato Y; Maeda Y; Shimizu S; Hossain MT; Ubukata S; Suzuki K; Sekiguchi T; Takénaka A
Acta Crystallogr D Biol Crystallogr; 2007 Oct; 63(Pt 10):1042-7. PubMed ID: 17881821
[TBL] [Abstract][Full Text] [Related]
2. Expanding tRNA recognition of a tRNA synthetase by a single amino acid change.
Feng L; Tumbula-Hansen D; Toogood H; Soll D
Proc Natl Acad Sci U S A; 2003 May; 100(10):5676-81. PubMed ID: 12730374
[TBL] [Abstract][Full Text] [Related]
3. Crystal structure of the N-terminal anticodon-binding domain of the nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori.
Songsiriritthigul C; Suebka S; Chen CJ; Fuengfuloy P; Chuawong P
Acta Crystallogr F Struct Biol Commun; 2017 Feb; 73(Pt 2):62-69. PubMed ID: 28177315
[TBL] [Abstract][Full Text] [Related]
4. Two residues in the anticodon recognition domain of the aspartyl-tRNA synthetase from Pseudomonas aeruginosa are individually implicated in the recognition of tRNAAsn.
Bernard D; Akochy PM; Beaulieu D; Lapointe J; Roy PH
J Bacteriol; 2006 Jan; 188(1):269-74. PubMed ID: 16352843
[TBL] [Abstract][Full Text] [Related]
5. Structural basis of the water-assisted asparagine recognition by asparaginyl-tRNA synthetase.
Iwasaki W; Sekine S; Kuroishi C; Kuramitsu S; Shirouzu M; Yokoyama S
J Mol Biol; 2006 Jul; 360(2):329-42. PubMed ID: 16753178
[TBL] [Abstract][Full Text] [Related]
6. The free yeast aspartyl-tRNA synthetase differs from the tRNA(Asp)-complexed enzyme by structural changes in the catalytic site, hinge region, and anticodon-binding domain.
Sauter C; Lorber B; Cavarelli J; Moras D; Giegé R
J Mol Biol; 2000 Jun; 299(5):1313-24. PubMed ID: 10873455
[TBL] [Abstract][Full Text] [Related]
7. Specific amino acid recognition by aspartyl-tRNA synthetase studied by free energy simulations.
Archontis G; Simonson T; Moras D; Karplus M
J Mol Biol; 1998 Feb; 275(5):823-46. PubMed ID: 9480772
[TBL] [Abstract][Full Text] [Related]
8. The nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori: anticodon-binding domain mutations that impact tRNA specificity and heterologous toxicity.
Chuawong P; Hendrickson TL
Biochemistry; 2006 Jul; 45(26):8079-87. PubMed ID: 16800632
[TBL] [Abstract][Full Text] [Related]
9. Binding free energies and free energy components from molecular dynamics and Poisson-Boltzmann calculations. Application to amino acid recognition by aspartyl-tRNA synthetase.
Archontis G; Simonson T; Karplus M
J Mol Biol; 2001 Feb; 306(2):307-27. PubMed ID: 11237602
[TBL] [Abstract][Full Text] [Related]
10. Yeast tRNA(Asp) recognition by its cognate class II aminoacyl-tRNA synthetase.
Cavarelli J; Rees B; Ruff M; Thierry JC; Moras D
Nature; 1993 Mar; 362(6416):181-4. PubMed ID: 8450889
[TBL] [Abstract][Full Text] [Related]
11. An intermediate step in the recognition of tRNA(Asp) by aspartyl-tRNA synthetase.
Briand C; Poterszman A; Eiler S; Webster G; Thierry J; Moras D
J Mol Biol; 2000 Jun; 299(4):1051-60. PubMed ID: 10843857
[TBL] [Abstract][Full Text] [Related]
12. Anticodon-binding domain swapping in a nondiscriminating aspartyl-tRNA synthetase reveals contributions to tRNA specificity and catalytic activity.
Chuawong P; Likittrakulwong W; Suebka S; Wiriyatanakorn N; Saparpakorn P; Taweesablamlert A; Sudprasert W; Hendrickson T; Svasti J
Proteins; 2020 Sep; 88(9):1133-1142. PubMed ID: 32067260
[TBL] [Abstract][Full Text] [Related]
13. An intricate RNA structure with two tRNA-derived motifs directs complex formation between yeast aspartyl-tRNA synthetase and its mRNA.
Ryckelynck M; Masquida B; Giegé R; Frugier M
J Mol Biol; 2005 Dec; 354(3):614-29. PubMed ID: 16257416
[TBL] [Abstract][Full Text] [Related]
14. Identity of prokaryotic and eukaryotic tRNA(Asp) for aminoacylation by aspartyl-tRNA synthetase from Thermus thermophilus.
Becker HD; Giegé R; Kern D
Biochemistry; 1996 Jun; 35(23):7447-58. PubMed ID: 8652522
[TBL] [Abstract][Full Text] [Related]
15. Yeast aspartyl-tRNA synthetase residues interacting with tRNA(Asp) identity bases connectively contribute to tRNA(Asp) binding in the ground and transition-state complex and discriminate against non-cognate tRNAs.
Eriani G; Gangloff J
J Mol Biol; 1999 Aug; 291(4):761-73. PubMed ID: 10452887
[TBL] [Abstract][Full Text] [Related]
16. Crystal structure of the archaeal asparagine synthetase: interrelation with aspartyl-tRNA and asparaginyl-tRNA synthetases.
Blaise M; Fréchin M; Oliéric V; Charron C; Sauter C; Lorber B; Roy H; Kern D
J Mol Biol; 2011 Sep; 412(3):437-52. PubMed ID: 21820443
[TBL] [Abstract][Full Text] [Related]
17. Evolutionary divergence of the archaeal aspartyl-tRNA synthetases into discriminating and nondiscriminating forms.
Tumbula-Hansen D; Feng L; Toogood H; Stetter KO; Söll D
J Biol Chem; 2002 Oct; 277(40):37184-90. PubMed ID: 12149259
[TBL] [Abstract][Full Text] [Related]
18. Single amino acid changes in AspRS reveal alternative routes for expanding its tRNA repertoire in vivo.
Martin F; Barends S; Eriani G
Nucleic Acids Res; 2004; 32(13):4081-9. PubMed ID: 15289581
[TBL] [Abstract][Full Text] [Related]
19. Crystal structure of glutamyl-queuosine tRNAAsp synthetase complexed with L-glutamate: structural elements mediating tRNA-independent activation of glutamate and glutamylation of tRNAAsp anticodon.
Blaise M; Olieric V; Sauter C; Lorber B; Roy B; Karmakar S; Banerjee R; Becker HD; Kern D
J Mol Biol; 2008 Sep; 381(5):1224-37. PubMed ID: 18602926
[TBL] [Abstract][Full Text] [Related]
20. tRNA anticodon recognition and specification within subclass IIb aminoacyl-tRNA synthetases.
Commans S; Lazard M; Delort F; Blanquet S; Plateau P
J Mol Biol; 1998 May; 278(4):801-13. PubMed ID: 9614943
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
