These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
217 related articles for article (PubMed ID: 17893327)
1. Single-stranded DNA structure and positional context of the target cytidine determine the enzymatic efficiency of AID. Larijani M; Martin A Mol Cell Biol; 2007 Dec; 27(23):8038-48. PubMed ID: 17893327 [TBL] [Abstract][Full Text] [Related]
2. AID associates with single-stranded DNA with high affinity and a long complex half-life in a sequence-independent manner. Larijani M; Petrov AP; Kolenchenko O; Berru M; Krylov SN; Martin A Mol Cell Biol; 2007 Jan; 27(1):20-30. PubMed ID: 17060445 [TBL] [Abstract][Full Text] [Related]
3. Transcription-targeted DNA deamination by the AID antibody diversification enzyme. Chaudhuri J; Tian M; Khuong C; Chua K; Pinaud E; Alt FW Nature; 2003 Apr; 422(6933):726-30. PubMed ID: 12692563 [TBL] [Abstract][Full Text] [Related]
4. Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution. Senavirathne G; Jaszczur M; Auerbach PA; Upton TG; Chelico L; Goodman MF; Rueda D J Biol Chem; 2012 May; 287(19):15826-35. PubMed ID: 22362763 [TBL] [Abstract][Full Text] [Related]
5. Negative supercoiling creates single-stranded patches of DNA that are substrates for AID-mediated mutagenesis. Parsa JY; Ramachandran S; Zaheen A; Nepal RM; Kapelnikov A; Belcheva A; Berru M; Ronai D; Martin A PLoS Genet; 2012 Feb; 8(2):e1002518. PubMed ID: 22346767 [TBL] [Abstract][Full Text] [Related]
6. DNA/RNA hybrid substrates modulate the catalytic activity of purified AID. Abdouni HS; King JJ; Ghorbani A; Fifield H; Berghuis L; Larijani M Mol Immunol; 2018 Jan; 93():94-106. PubMed ID: 29161581 [TBL] [Abstract][Full Text] [Related]
7. Fine-structure analysis of activation-induced deaminase accessibility to class switch region R-loops. Yu K; Roy D; Bayramyan M; Haworth IS; Lieber MR Mol Cell Biol; 2005 Mar; 25(5):1730-6. PubMed ID: 15713630 [TBL] [Abstract][Full Text] [Related]
8. Activation-induced cytidine deaminase can target multiple topologies of double-stranded DNA in a transcription-independent manner. Branton SA; Ghorbani A; Bolt BN; Fifield H; Berghuis LM; Larijani M FASEB J; 2020 Jul; 34(7):9245-9268. PubMed ID: 32437054 [TBL] [Abstract][Full Text] [Related]
9. Nucleic acid determinants for selective deamination of DNA over RNA by activation-induced deaminase. Nabel CS; Lee JW; Wang LC; Kohli RM Proc Natl Acad Sci U S A; 2013 Aug; 110(35):14225-30. PubMed ID: 23942124 [TBL] [Abstract][Full Text] [Related]
10. Impact of phosphorylation and phosphorylation-null mutants on the activity and deamination specificity of activation-induced cytidine deaminase. Pham P; Smolka MB; Calabrese P; Landolph A; Zhang K; Zhou H; Goodman MF J Biol Chem; 2008 Jun; 283(25):17428-39. PubMed ID: 18417471 [TBL] [Abstract][Full Text] [Related]
11. Methylation protects cytidines from AID-mediated deamination. Larijani M; Frieder D; Sonbuchner TM; Bransteitter R; Goodman MF; Bouhassira EE; Scharff MD; Martin A Mol Immunol; 2005 Mar; 42(5):599-604. PubMed ID: 15607819 [TBL] [Abstract][Full Text] [Related]
12. Transcription enhances AID-mediated cytidine deamination by exposing single-stranded DNA on the nontemplate strand. Ramiro AR; Stavropoulos P; Jankovic M; Nussenzweig MC Nat Immunol; 2003 May; 4(5):452-6. PubMed ID: 12692548 [TBL] [Abstract][Full Text] [Related]
14. Analysis of a single-stranded DNA-scanning process in which activation-induced deoxycytidine deaminase (AID) deaminates C to U haphazardly and inefficiently to ensure mutational diversity. Pham P; Calabrese P; Park SJ; Goodman MF J Biol Chem; 2011 Jul; 286(28):24931-42. PubMed ID: 21572036 [TBL] [Abstract][Full Text] [Related]
15. DNA substrate length and surrounding sequence affect the activation-induced deaminase activity at cytidine. Yu K; Huang FT; Lieber MR J Biol Chem; 2004 Feb; 279(8):6496-500. PubMed ID: 14645244 [TBL] [Abstract][Full Text] [Related]
16. Crystal structure of APOBEC3A bound to single-stranded DNA reveals structural basis for cytidine deamination and specificity. Kouno T; Silvas TV; Hilbert BJ; Shandilya SMD; Bohn MF; Kelch BA; Royer WE; Somasundaran M; Kurt Yilmaz N; Matsuo H; Schiffer CA Nat Commun; 2017 Apr; 8():15024. PubMed ID: 28452355 [TBL] [Abstract][Full Text] [Related]
17. Activation-induced deaminase, AID, is catalytically active as a monomer on single-stranded DNA. Brar SS; Sacho EJ; Tessmer I; Croteau DL; Erie DA; Diaz M DNA Repair (Amst); 2008 Jan; 7(1):77-87. PubMed ID: 17889624 [TBL] [Abstract][Full Text] [Related]
18. Efficient deamination of 5-methylcytidine and 5-substituted cytidine residues in DNA by human APOBEC3A cytidine deaminase. Suspène R; Aynaud MM; Vartanian JP; Wain-Hobson S PLoS One; 2013; 8(6):e63461. PubMed ID: 23840298 [TBL] [Abstract][Full Text] [Related]
19. Mutations in human AID differentially affect its ability to deaminate cytidine and 5-methylcytidine in ssDNA substrates in vitro. Budzko L; Jackowiak P; Kamel K; Sarzynska J; Bujnicki JM; Figlerowicz M Sci Rep; 2017 Jun; 7(1):3873. PubMed ID: 28634398 [TBL] [Abstract][Full Text] [Related]