BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

166 related articles for article (PubMed ID: 17906332)

  • 1. A microarray analysis for differential gene expression in the soybean genome using Bioconductor and R.
    Gregory Alvord W; Roayaei JA; Quiñones OA; Schneider KT
    Brief Bioinform; 2007 Nov; 8(6):415-31. PubMed ID: 17906332
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Microarray data analysis.
    Mohapatra SK; Krishnan A
    Methods Mol Biol; 2011; 678():27-43. PubMed ID: 20931370
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Bioinformatics analysis of microarray data.
    Zhang Y; Szustakowski J; Schinke M
    Methods Mol Biol; 2009; 573():259-84. PubMed ID: 19763933
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Pre-processing of microarray data and analysis of differential expression.
    Durinck S
    Methods Mol Biol; 2008; 452():89-110. PubMed ID: 18563370
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RefPlus: an R package extending the RMA Algorithm.
    Harbron C; Chang KM; South MC
    Bioinformatics; 2007 Sep; 23(18):2493-4. PubMed ID: 17623700
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Calculation of reliable transcript levels of annotated genes on the basis of multiple probe-sets in Affymetrix microarrays.
    Jaksik R; Polańska J; Herok R; Rzeszowska-Wolny J
    Acta Biochim Pol; 2009; 56(2):271-7. PubMed ID: 19436837
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A new summarization method for Affymetrix probe level data.
    Hochreiter S; Clevert DA; Obermayer K
    Bioinformatics; 2006 Apr; 22(8):943-9. PubMed ID: 16473874
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A new method for class prediction based on signed-rank algorithms applied to Affymetrix microarray experiments.
    Rème T; Hose D; De Vos J; Vassal A; Poulain PO; Pantesco V; Goldschmidt H; Klein B
    BMC Bioinformatics; 2008 Jan; 9():16. PubMed ID: 18190711
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis.
    Orlov YL; Zhou J; Lipovich L; Shahab A; Kuznetsov VA
    In Silico Biol; 2007; 7(3):241-60. PubMed ID: 18415975
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The use of open source bioinformatics tools to dissect transcriptomic data.
    Nitsche BM; Ram AF; Meyer V
    Methods Mol Biol; 2012; 835():311-31. PubMed ID: 22183662
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Increased power of microarray analysis by use of an algorithm based on a multivariate procedure.
    Krohn K; Eszlinger M; Paschke R; Roeder I; Schuster E
    Bioinformatics; 2005 Sep; 21(17):3530-4. PubMed ID: 15998661
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A; Benovoy D; Kwan T; Gaffney DJ; Jensen RV; Majewski J
    BMC Genomics; 2008 Nov; 9():529. PubMed ID: 18990248
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Robustified MANOVA with applications in detecting differentially expressed genes from oligonucleotide arrays.
    Xu J; Cui X
    Bioinformatics; 2008 Apr; 24(8):1056-62. PubMed ID: 18316342
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of Affymetrix GeneChip expression measures.
    Irizarry RA; Wu Z; Jaffee HA
    Bioinformatics; 2006 Apr; 22(7):789-94. PubMed ID: 16410320
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A distribution free summarization method for Affymetrix GeneChip arrays.
    Chen Z; McGee M; Liu Q; Scheuermann RH
    Bioinformatics; 2007 Feb; 23(3):321-7. PubMed ID: 17148508
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Assessing quality and normalization of microarrays: case studies using neurological genomic data.
    Hershey AD; Burdine D; Liu C; Nick TG; Gilbert DL; Glauser TA
    Acta Neurol Scand; 2008 Jul; 118(1):29-41. PubMed ID: 18205880
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CARMAweb: comprehensive R- and bioconductor-based web service for microarray data analysis.
    Rainer J; Sanchez-Cabo F; Stocker G; Sturn A; Trajanoski Z
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W498-503. PubMed ID: 16845058
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Differential expression of genes in soybean in response to the causal agent of Asian soybean rust (Phakopsora pachyrhizi Sydow) is soybean growth stage-specific.
    Panthee DR; Marois JJ; Wright DL; Narváez D; Yuan JS; Stewart CN
    Theor Appl Genet; 2009 Jan; 118(2):359-70. PubMed ID: 18853130
    [TBL] [Abstract][Full Text] [Related]  

  • 19. oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.
    Sanges R; Cordero F; Calogero RA
    Bioinformatics; 2007 Dec; 23(24):3406-8. PubMed ID: 17875544
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Statistical analysis of microarray data.
    Reimers M
    Addict Biol; 2005 Mar; 10(1):23-35. PubMed ID: 15849016
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.