BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 17914235)

  • 1. Use of secondary structural information and C alpha-C alpha distance restraints to model protein structures with MODELLER.
    Reddy BV; Kaznessis YN
    J Biosci; 2007 Aug; 32(5):929-36. PubMed ID: 17914235
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks.
    Walsh I; Baù D; Martin AJ; Mooney C; Vullo A; Pollastri G
    BMC Struct Biol; 2009 Jan; 9():5. PubMed ID: 19183478
    [TBL] [Abstract][Full Text] [Related]  

  • 3. [A turning point in the knowledge of the structure-function-activity relations of elastin].
    Alix AJ
    J Soc Biol; 2001; 195(2):181-93. PubMed ID: 11727705
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Recoverable one-dimensional encoding of three-dimensional protein structures.
    Kinjo AR; Nishikawa K
    Bioinformatics; 2005 May; 21(10):2167-70. PubMed ID: 15722374
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling.
    Meier A; Söding J
    PLoS Comput Biol; 2015 Oct; 11(10):e1004343. PubMed ID: 26496371
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein secondary structure prediction with SPARROW.
    Bettella F; Rasinski D; Knapp EW
    J Chem Inf Model; 2012 Feb; 52(2):545-56. PubMed ID: 22224407
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Predicting alpha-helix and beta-strand segments of globular proteins.
    Solovyev VV; Salamov AA
    Comput Appl Biosci; 1994 Dec; 10(6):661-9. PubMed ID: 7704665
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Benchmarking of TASSER_2.0: an improved protein structure prediction algorithm with more accurate predicted contact restraints.
    Lee SY; Skolnick J
    Biophys J; 2008 Aug; 95(4):1956-64. PubMed ID: 18487301
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sequence based residue depth prediction using evolutionary information and predicted secondary structure.
    Zhang H; Zhang T; Chen K; Shen S; Ruan J; Kurgan L
    BMC Bioinformatics; 2008 Sep; 9():388. PubMed ID: 18803867
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A comprehensive assessment of sequence-based and template-based methods for protein contact prediction.
    Wu S; Zhang Y
    Bioinformatics; 2008 Apr; 24(7):924-31. PubMed ID: 18296462
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CRNPRED: highly accurate prediction of one-dimensional protein structures by large-scale critical random networks.
    Kinjo AR; Nishikawa K
    BMC Bioinformatics; 2006 Sep; 7():401. PubMed ID: 16952323
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks.
    Kukic P; Mirabello C; Tradigo G; Walsh I; Veltri P; Pollastri G
    BMC Bioinformatics; 2014 Jan; 15():6. PubMed ID: 24410833
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An evaluation of automated homology modelling methods at low target template sequence similarity.
    Dalton JA; Jackson RM
    Bioinformatics; 2007 Aug; 23(15):1901-8. PubMed ID: 17510171
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TOUCHSTONE II: a new approach to ab initio protein structure prediction.
    Zhang Y; Kolinski A; Skolnick J
    Biophys J; 2003 Aug; 85(2):1145-64. PubMed ID: 12885659
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Nearest-neighbor effects on backbone alpha and beta carbon chemical shifts in proteins.
    Wang L; Eghbalnia HR; Markley JL
    J Biomol NMR; 2007 Nov; 39(3):247-57. PubMed ID: 17899393
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Effective inter-residue contact definitions for accurate protein fold recognition.
    Yuan C; Chen H; Kihara D
    BMC Bioinformatics; 2012 Nov; 13():292. PubMed ID: 23140471
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DeepCDpred: Inter-residue distance and contact prediction for improved prediction of protein structure.
    Ji S; Oruç T; Mead L; Rehman MF; Thomas CM; Butterworth S; Winn PJ
    PLoS One; 2019; 14(1):e0205214. PubMed ID: 30620738
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Fold assembly of small proteins using monte carlo simulations driven by restraints derived from multiple sequence alignments.
    Ortiz AR; Kolinski A; Skolnick J
    J Mol Biol; 1998 Mar; 277(2):419-48. PubMed ID: 9514747
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information.
    Pollastri G; Martin AJ; Mooney C; Vullo A
    BMC Bioinformatics; 2007 Jun; 8():201. PubMed ID: 17570843
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction of secondary structural content of proteins from their amino acid composition alone. II. The paradox with secondary structural class.
    Eisenhaber F; Frömmel C; Argos P
    Proteins; 1996 Jun; 25(2):169-79. PubMed ID: 8811733
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.