324 related articles for article (PubMed ID: 17935148)
1. Use of estimated evolutionary strength at the codon level improves the prediction of disease-related protein mutations in humans.
Capriotti E; Arbiza L; Casadio R; Dopazo J; Dopazo H; Marti-Renom MA
Hum Mutat; 2008 Jan; 29(1):198-204. PubMed ID: 17935148
[TBL] [Abstract][Full Text] [Related]
2. Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information.
Capriotti E; Calabrese R; Casadio R
Bioinformatics; 2006 Nov; 22(22):2729-34. PubMed ID: 16895930
[TBL] [Abstract][Full Text] [Related]
3. Selective pressures at a codon-level predict deleterious mutations in human disease genes.
Arbiza L; Duchi S; Montaner D; Burguet J; Pantoja-Uceda D; Pineda-Lucena A; Dopazo J; Dopazo H
J Mol Biol; 2006 May; 358(5):1390-404. PubMed ID: 16584746
[TBL] [Abstract][Full Text] [Related]
4. Prediction of the phenotypic effects of non-synonymous single nucleotide polymorphisms using structural and evolutionary information.
Bao L; Cui Y
Bioinformatics; 2005 May; 21(10):2185-90. PubMed ID: 15746281
[TBL] [Abstract][Full Text] [Related]
5. Detailed computational study of p53 and p16: using evolutionary sequence analysis and disease-associated mutations to predict the functional consequences of allelic variants.
Greenblatt MS; Beaudet JG; Gump JR; Godin KS; Trombley L; Koh J; Bond JP
Oncogene; 2003 Feb; 22(8):1150-63. PubMed ID: 12606942
[TBL] [Abstract][Full Text] [Related]
6. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
Barenboim M; Masso M; Vaisman II; Jamison DC
Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
[TBL] [Abstract][Full Text] [Related]
7. Prediction of function changes associated with single-point protein mutations using support vector machines (SVMs).
Gao S; Zhang N; Duan GY; Yang Z; Ruan JS; Zhang T
Hum Mutat; 2009 Aug; 30(8):1161-6. PubMed ID: 19462464
[TBL] [Abstract][Full Text] [Related]
8. Cataloging coding sequence variations in human genome databases.
Won HH; Kim HJ; Lee KA; Kim JW
PLoS One; 2008; 3(10):e3575. PubMed ID: 18974781
[TBL] [Abstract][Full Text] [Related]
9. Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction.
Lei Z; Dai Y
BMC Bioinformatics; 2006 Nov; 7():491. PubMed ID: 17090318
[TBL] [Abstract][Full Text] [Related]
10. DPROT: prediction of disordered proteins using evolutionary information.
Sethi D; Garg A; Raghava GP
Amino Acids; 2008 Oct; 35(3):599-605. PubMed ID: 18425404
[TBL] [Abstract][Full Text] [Related]
11. In silico searching for disease-associated functional DNA variants.
Sethumadhavan R; Doss CG; Rajasekaran R
Methods Mol Biol; 2011; 760():239-50. PubMed ID: 21780001
[TBL] [Abstract][Full Text] [Related]
12. Euk-mPLoc: a fusion classifier for large-scale eukaryotic protein subcellular location prediction by incorporating multiple sites.
Chou KC; Shen HB
J Proteome Res; 2007 May; 6(5):1728-34. PubMed ID: 17397210
[TBL] [Abstract][Full Text] [Related]
13. Prediction of protein structure class by coupling improved genetic algorithm and support vector machine.
Li ZC; Zhou XB; Lin YR; Zou XY
Amino Acids; 2008 Oct; 35(3):581-90. PubMed ID: 18427714
[TBL] [Abstract][Full Text] [Related]
14. Mapping SNPs to protein sequence and structure data.
Cavallo A; Martin AC
Bioinformatics; 2005 Apr; 21(8):1443-50. PubMed ID: 15613399
[TBL] [Abstract][Full Text] [Related]
15. JIGSAW: integration of multiple sources of evidence for gene prediction.
Allen JE; Salzberg SL
Bioinformatics; 2005 Sep; 21(18):3596-603. PubMed ID: 16076884
[TBL] [Abstract][Full Text] [Related]
16. Annotating single amino acid polymorphisms in the UniProt/Swiss-Prot knowledgebase.
Yip YL; Famiglietti M; Gos A; Duek PD; David FP; Gateau A; Bairoch A
Hum Mutat; 2008 Mar; 29(3):361-6. PubMed ID: 18175334
[TBL] [Abstract][Full Text] [Related]
17. A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search.
Garg A; Raghava GP
In Silico Biol; 2008; 8(2):129-40. PubMed ID: 18928201
[TBL] [Abstract][Full Text] [Related]
18. Improving sequence variant descriptions in mutation databases and literature using the Mutalyzer sequence variation nomenclature checker.
Wildeman M; van Ophuizen E; den Dunnen JT; Taschner PE
Hum Mutat; 2008 Jan; 29(1):6-13. PubMed ID: 18000842
[TBL] [Abstract][Full Text] [Related]
19. Tracing evolutionary pressure.
Ye K; Vriend G; IJzerman AP
Bioinformatics; 2008 Apr; 24(7):908-15. PubMed ID: 18304936
[TBL] [Abstract][Full Text] [Related]
20. CCHMM_PROF: a HMM-based coiled-coil predictor with evolutionary information.
Bartoli L; Fariselli P; Krogh A; Casadio R
Bioinformatics; 2009 Nov; 25(21):2757-63. PubMed ID: 19744995
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
