297 related articles for article (PubMed ID: 17975268)
1. Algorithms for efficient near-perfect phylogenetic tree reconstruction in theory and practice.
Sridhar S; Dhamdhere K; Blelloch G; Halperin E; Ravi R; Schwartz R
IEEE/ACM Trans Comput Biol Bioinform; 2007; 4(4):561-71. PubMed ID: 17975268
[TBL] [Abstract][Full Text] [Related]
2. Bayesian coestimation of phylogeny and sequence alignment.
Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
[TBL] [Abstract][Full Text] [Related]
3. Perfect Phylogeny Problems with Missing Values.
Kirkpatrick B; Stevens K
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(5):928-41. PubMed ID: 26356864
[TBL] [Abstract][Full Text] [Related]
4. Optimal imperfect phylogeny reconstruction and haplotyping (IPPH).
Sridhar S; Blelloch GE; Ravi R; Schwartz R
Comput Syst Bioinformatics Conf; 2006; ():199-210. PubMed ID: 17369638
[TBL] [Abstract][Full Text] [Related]
5. Explaining evolution via constrained persistent perfect phylogeny.
Bonizzoni P; Carrieri AP; Della Vedova G; Trucco G
BMC Genomics; 2014; 15 Suppl 6(Suppl 6):S10. PubMed ID: 25572381
[TBL] [Abstract][Full Text] [Related]
6. Reconstruction of ancestral genomic sequences using likelihood.
Elias I; Tuller T
J Comput Biol; 2007 Mar; 14(2):216-37. PubMed ID: 17456016
[TBL] [Abstract][Full Text] [Related]
7. The Multi-State Perfect Phylogeny Problem with missing and removable data: solutions via integer-programming and chordal graph theory.
Gusfield D
J Comput Biol; 2010 Mar; 17(3):383-99. PubMed ID: 20377452
[TBL] [Abstract][Full Text] [Related]
8. Refining phylogenetic trees given additional data: an algorithm based on parsimony.
Wu T; Moulton V; Steel M
IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(1):118-25. PubMed ID: 19179705
[TBL] [Abstract][Full Text] [Related]
9. Efficient algorithms for knowledge-enhanced supertree and supermatrix phylogenetic problems.
Wehe A; Burleigh JG; Eulenstein O
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1432-41. PubMed ID: 24407302
[TBL] [Abstract][Full Text] [Related]
10. Minimum-flip supertrees: complexity and algorithms.
Chen D; Eulenstein O; Fernandez-Baca D; Sanderson M
IEEE/ACM Trans Comput Biol Bioinform; 2006; 3(2):165-73. PubMed ID: 17048402
[TBL] [Abstract][Full Text] [Related]
11. Fixed-parameter tractability of the maximum agreement supertree problem.
Guillemot S; Berry V
IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(2):342-53. PubMed ID: 20431153
[TBL] [Abstract][Full Text] [Related]
12. Evolutionary tree reconstruction using structural expectation maximization and homotopy.
Li J; Guo M
Genet Mol Res; 2007 Sep; 6(3):522-33. PubMed ID: 17985305
[TBL] [Abstract][Full Text] [Related]
13. Exact Algorithms for Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees.
Kordi M; Bansal MS
IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1077-1090. PubMed ID: 28622673
[TBL] [Abstract][Full Text] [Related]
14. Constructing splits graphs.
Dress AW; Huson DH
IEEE/ACM Trans Comput Biol Bioinform; 2004; 1(3):109-15. PubMed ID: 17048386
[TBL] [Abstract][Full Text] [Related]
15. A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities.
Bastien O; Ortet P; Roy S; Maréchal E
BMC Bioinformatics; 2005 Mar; 6():49. PubMed ID: 15757521
[TBL] [Abstract][Full Text] [Related]
16. Comparison of tree-child phylogenetic networks.
Cardona G; Rosselló F; Valiente G
IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(4):552-69. PubMed ID: 19875855
[TBL] [Abstract][Full Text] [Related]
17. Direct maximum parsimony phylogeny reconstruction from genotype data.
Sridhar S; Lam F; Blelloch GE; Ravi R; Schwartz R
BMC Bioinformatics; 2007 Dec; 8():472. PubMed ID: 18053244
[TBL] [Abstract][Full Text] [Related]
18. Extensions and improvements to the chordal graph approach to the multistate perfect phylogeny problem.
Gysel R; Gusfield D
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(4):912-7. PubMed ID: 21301033
[TBL] [Abstract][Full Text] [Related]
19. A Third Strike Against Perfect Phylogeny.
Iersel LV; Jones M; Kelk S
Syst Biol; 2019 Sep; 68(5):814-827. PubMed ID: 30865279
[TBL] [Abstract][Full Text] [Related]
20. Efficient FPT Algorithms for (Strict) Compatibility of Unrooted Phylogenetic Trees.
Baste J; Paul C; Sau I; Scornavacca C
Bull Math Biol; 2017 Apr; 79(4):920-938. PubMed ID: 28247121
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]