134 related articles for article (PubMed ID: 17995298)
1. Reconstructing the free-energy landscape of a mechanically unfolded model protein.
Imparato A; Luccioli S; Torcini A
Phys Rev Lett; 2007 Oct; 99(16):168101. PubMed ID: 17995298
[TBL] [Abstract][Full Text] [Related]
2. Free-energy landscape of mechanically unfolded model proteins: extended Jarzinsky versus inherent structure reconstruction.
Luccioli S; Imparato A; Torcini A
Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Sep; 78(3 Pt 1):031907. PubMed ID: 18851065
[TBL] [Abstract][Full Text] [Related]
3. Topography of the free-energy landscape probed via mechanical unfolding of proteins.
Kirmizialtin S; Huang L; Makarov DE
J Chem Phys; 2005 Jun; 122(23):234915. PubMed ID: 16008495
[TBL] [Abstract][Full Text] [Related]
4. Protein mechanical unfolding: a model with binary variables.
Imparato A; Pelizzola A; Zamparo M
J Chem Phys; 2007 Oct; 127(14):145105. PubMed ID: 17935449
[TBL] [Abstract][Full Text] [Related]
5. Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality.
West DK; Olmsted PD; Paci E
J Chem Phys; 2006 Nov; 125(20):204910. PubMed ID: 17144743
[TBL] [Abstract][Full Text] [Related]
6. Modeling protein thermodynamics and fluctuations at the mesoscale.
Nakagawa N; Peyrard M
Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Oct; 74(4 Pt 1):041916. PubMed ID: 17155105
[TBL] [Abstract][Full Text] [Related]
7. Velocity convergence of free energy surfaces from single-molecule measurements using Jarzynski's equality.
Harris NC; Kiang CH
Phys Rev E Stat Nonlin Soft Matter Phys; 2009 Apr; 79(4 Pt 1):041912. PubMed ID: 19518261
[TBL] [Abstract][Full Text] [Related]
8. Folding of horse cytochrome c in the reduced state.
Bhuyan AK; Udgaonkar JB
J Mol Biol; 2001 Oct; 312(5):1135-60. PubMed ID: 11580255
[TBL] [Abstract][Full Text] [Related]
9. Energy optimization for off-lattice protein folding.
Huang W; Chen M; Lü Z
Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Oct; 74(4 Pt 1):041907. PubMed ID: 17155096
[TBL] [Abstract][Full Text] [Related]
10. A study of density of states and ground states in hydrophobic-hydrophilic protein folding models by equi-energy sampling.
Kou SC; Oh J; Wong WH
J Chem Phys; 2006 Jun; 124(24):244903. PubMed ID: 16821999
[TBL] [Abstract][Full Text] [Related]
11. Role of pulling direction in understanding the energy landscape of proteins.
Rajesh R; Giri D; Jensen I; Kumar S
Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Aug; 78(2 Pt 1):021905. PubMed ID: 18850863
[TBL] [Abstract][Full Text] [Related]
12. Hidden structure in protein energy landscapes.
Ming D; Anghel M; Wall ME
Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Feb; 77(2 Pt 1):021902. PubMed ID: 18352046
[TBL] [Abstract][Full Text] [Related]
13. Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties.
Veitshans T; Klimov D; Thirumalai D
Fold Des; 1997; 2(1):1-22. PubMed ID: 9080195
[TBL] [Abstract][Full Text] [Related]
14. Thermodynamics of downhill folding: multi-probe analysis of PDD, a protein that folds over a marginal free energy barrier.
Naganathan AN; Muñoz V
J Phys Chem B; 2014 Jul; 118(30):8982-94. PubMed ID: 24988372
[TBL] [Abstract][Full Text] [Related]
15. Energy landscape, structure and rate effects on strength properties of alpha-helical proteins.
Bertaud J; Hester J; Jimenez DD; Buehler MJ
J Phys Condens Matter; 2010 Jan; 22(3):035102. PubMed ID: 21386278
[TBL] [Abstract][Full Text] [Related]
16. How do chemical denaturants affect the mechanical folding and unfolding of proteins?
Cao Y; Li H
J Mol Biol; 2008 Jan; 375(1):316-24. PubMed ID: 18021802
[TBL] [Abstract][Full Text] [Related]
17. Hummer and Szabo-like potential of mean force estimator for bidirectional nonequilibrium pulling experiments/simulations.
Nicolini P; Procacci P; Chelli R
J Phys Chem B; 2010 Jul; 114(29):9546-54. PubMed ID: 20597536
[TBL] [Abstract][Full Text] [Related]
18. Single-molecule dynamics of mechanical coiled-coil unzipping.
Bornschlögl T; Rief M
Langmuir; 2008 Feb; 24(4):1338-42. PubMed ID: 17973511
[TBL] [Abstract][Full Text] [Related]
19. Free energy surfaces from single-molecule force spectroscopy.
Hummer G; Szabo A
Acc Chem Res; 2005 Jul; 38(7):504-13. PubMed ID: 16028884
[TBL] [Abstract][Full Text] [Related]
20. Protein folding as flow across a network of folding-unfolding pathways. 1. The mid-transition case.
Ivankov DN; Finkelstein AV
J Phys Chem B; 2010 Jun; 114(23):7920-9. PubMed ID: 20443590
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
