These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 17998210)

  • 1. Conformational transitions in adenylate kinase. Allosteric communication reduces misligation.
    Whitford PC; Gosavi S; Onuchic JN
    J Biol Chem; 2008 Jan; 283(4):2042-8. PubMed ID: 17998210
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Many local motions cooperate to produce the adenylate kinase conformational transition.
    Daily MD; Phillips GN; Cui Q
    J Mol Biol; 2010 Jul; 400(3):618-31. PubMed ID: 20471396
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Conformational transitions of adenylate kinase: switching by cracking.
    Whitford PC; Miyashita O; Levy Y; Onuchic JN
    J Mol Biol; 2007 Mar; 366(5):1661-71. PubMed ID: 17217965
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dynamic coupling between the LID and NMP domain motions in the catalytic conversion of ATP and AMP to ADP by adenylate kinase.
    Jana B; Adkar BV; Biswas R; Bagchi B
    J Chem Phys; 2011 Jan; 134(3):035101. PubMed ID: 21261390
    [TBL] [Abstract][Full Text] [Related]  

  • 5. In the multi-domain protein adenylate kinase, domain insertion facilitates cooperative folding while accommodating function at domain interfaces.
    Giri Rao VV; Gosavi S
    PLoS Comput Biol; 2014 Nov; 10(11):e1003938. PubMed ID: 25393408
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Conformational heterogeneity within the LID domain mediates substrate binding to Escherichia coli adenylate kinase: function follows fluctuations.
    Schrank TP; Wrabl JO; Hilser VJ
    Top Curr Chem; 2013; 337():95-121. PubMed ID: 23543318
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Folding funnels and conformational transitions via hinge-bending motions.
    Kumar S; Ma B; Tsai CJ; Wolfson H; Nussinov R
    Cell Biochem Biophys; 1999; 31(2):141-64. PubMed ID: 10593256
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Molecular dynamics studies on the conformational transitions of adenylate kinase: a computational evidence for the conformational selection mechanism.
    Ping J; Hao P; Li YX; Wang JF
    Biomed Res Int; 2013; 2013():628536. PubMed ID: 23936827
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion.
    Liu R; Xu H; Wei Z; Wang Y; Lin Y; Gong W
    Biochem Biophys Res Commun; 2009 Jan; 379(1):92-7. PubMed ID: 19073142
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Role of Repeated Conformational Transitions in Substrate Binding of Adenylate Kinase.
    Lu J; Scheerer D; Haran G; Li W; Wang W
    J Phys Chem B; 2022 Oct; 126(41):8188-8201. PubMed ID: 36222098
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Double-Well Ultra-Coarse-Grained Model to Describe Protein Conformational Transitions.
    Zhang Y; Cao Z; Zhang JZ; Xia F
    J Chem Theory Comput; 2020 Oct; 16(10):6678-6689. PubMed ID: 32926616
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Molecular dynamics of apo-adenylate kinase: a principal component analysis.
    Lou H; Cukier RI
    J Phys Chem B; 2006 Jun; 110(25):12796-808. PubMed ID: 16800615
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The Atomistic Mechanism of Conformational Transition of Adenylate Kinase Investigated by Lorentzian Structure-Based Potential.
    Lee J; Joo K; Brooks BR; Lee J
    J Chem Theory Comput; 2015 Jul; 11(7):3211-24. PubMed ID: 26575758
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A novel view of domain flexibility in E. coli adenylate kinase based on structural mode-coupling (15)N NMR relaxation.
    Tugarinov V; Shapiro YE; Liang Z; Freed JH; Meirovitch E
    J Mol Biol; 2002 Jan; 315(2):155-70. PubMed ID: 11779236
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Interconversion of functional motions between mesophilic and thermophilic adenylate kinases.
    Daily MD; Phillips GN; Cui Q
    PLoS Comput Biol; 2011 Jul; 7(7):e1002103. PubMed ID: 21779157
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Domain flexibility in ligand-free and inhibitor-bound Escherichia coli adenylate kinase based on a mode-coupling analysis of 15N spin relaxation.
    Shapiro YE; Kahana E; Tugarinov V; Liang Z; Freed JH; Meirovitch E
    Biochemistry; 2002 May; 41(20):6271-81. PubMed ID: 12009888
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Impacts of mutations on dynamic allostery of adenylate kinase.
    Song H; Wutthinitikornkit Y; Zhou X; Li J
    J Chem Phys; 2021 Jul; 155(3):035101. PubMed ID: 34293874
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Elucidating Dynamics of Adenylate Kinase from Enzyme Opening to Ligand Release.
    Nam K; Arattu Thodika AR; Grundström C; Sauer UH; Wolf-Watz M
    J Chem Inf Model; 2024 Jan; 64(1):150-163. PubMed ID: 38117131
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Minimum free energy path of ligand-induced transition in adenylate kinase.
    Matsunaga Y; Fujisaki H; Terada T; Furuta T; Moritsugu K; Kidera A
    PLoS Comput Biol; 2012; 8(6):e1002555. PubMed ID: 22685395
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fine structure of conformational ensembles in adenylate kinase.
    Wang Y; Makowski L
    Proteins; 2018 Mar; 86(3):332-343. PubMed ID: 29239025
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.