These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
145 related articles for article (PubMed ID: 18024496)
1. Predicting the folding pathway of engrailed homeodomain with a probabilistic roadmap enhanced reaction-path algorithm. Li DW; Yang H; Han L; Huo S Biophys J; 2008 Mar; 94(5):1622-9. PubMed ID: 18024496 [TBL] [Abstract][Full Text] [Related]
2. Methods for molecular dynamics simulations of protein folding/unfolding in solution. Beck DA; Daggett V Methods; 2004 Sep; 34(1):112-20. PubMed ID: 15283920 [TBL] [Abstract][Full Text] [Related]
3. Using robotics to fold proteins and dock ligands. Brutlag D; Apaydin S; Guestrin C; Hsu D; Varma C; Singh A; Latombe JC Bioinformatics; 2002; 18 Suppl 2():S74. PubMed ID: 12385986 [TBL] [Abstract][Full Text] [Related]
4. Using motion planning to study protein folding pathways. Amato NM; Song G J Comput Biol; 2002; 9(2):149-68. PubMed ID: 12015875 [TBL] [Abstract][Full Text] [Related]
5. A New Heuristic Algorithm for Protein Folding in the HP Model. Traykov M; Angelov S; Yanev N J Comput Biol; 2016 Aug; 23(8):662-8. PubMed ID: 27153764 [TBL] [Abstract][Full Text] [Related]
6. A Particle Swarm Optimization-Based Approach with Local Search for Predicting Protein Folding. Yang CH; Lin YS; Chuang LY; Chang HW J Comput Biol; 2017 Oct; 24(10):981-994. PubMed ID: 28287821 [TBL] [Abstract][Full Text] [Related]
7. Roadmap methods for protein folding. Moll M; Schwarz D; Kavraki LE Methods Mol Biol; 2008; 413():219-39. PubMed ID: 18075168 [TBL] [Abstract][Full Text] [Related]
8. Microscopic reversibility of protein folding in molecular dynamics simulations of the engrailed homeodomain. McCully ME; Beck DA; Daggett V Biochemistry; 2008 Jul; 47(27):7079-89. PubMed ID: 18553935 [TBL] [Abstract][Full Text] [Related]
9. Protein folding by motion planning. Thomas S; Song G; Amato NM Phys Biol; 2005 Nov; 2(4):S148-55. PubMed ID: 16280620 [TBL] [Abstract][Full Text] [Related]
10. All-atom level direct folding simulation of a betabetaalpha miniprotein. Jang S; Kim E; Pak Y J Chem Phys; 2008 Mar; 128(10):105102. PubMed ID: 18345926 [TBL] [Abstract][Full Text] [Related]
11. A branch and bound algorithm for the protein folding problem in the HP lattice model. Chen M; Huang WQ Genomics Proteomics Bioinformatics; 2005 Nov; 3(4):225-30. PubMed ID: 16689690 [TBL] [Abstract][Full Text] [Related]
12. Direct computation of long time processes in peptides and proteins: reaction path study of the coil-to-helix transition in polyalanine. Huo S; Straub JE Proteins; 1999 Aug; 36(2):249-61. PubMed ID: 10398371 [TBL] [Abstract][Full Text] [Related]
13. Protein design for diversity of sequences and conformations using dead-end elimination. Hanf KJ Methods Mol Biol; 2012; 899():127-44. PubMed ID: 22735950 [TBL] [Abstract][Full Text] [Related]
14. The simulation of the three-dimensional lattice hydrophobic-polar protein folding. Guo YZ; Feng EM J Chem Phys; 2006 Dec; 125(23):234703. PubMed ID: 17190566 [TBL] [Abstract][Full Text] [Related]
15. Extended particle swarm optimisation method for folding protein on triangular lattice. Guo Y; Wu Z; Wang Y; Wang Y IET Syst Biol; 2016 Feb; 10(1):30-3. PubMed ID: 26816397 [TBL] [Abstract][Full Text] [Related]
16. Stochastic roadmap simulation: an efficient representation and algorithm for analyzing molecular motion. Apaydin MS; Brutlag DL; Guestrin C; Hsu D; Latombe JC; Varma C J Comput Biol; 2003; 10(3-4):257-81. PubMed ID: 12935328 [TBL] [Abstract][Full Text] [Related]
17. Understanding ensemble protein folding at atomic detail. Hubner IA; Deeds EJ; Shakhnovich EI Proc Natl Acad Sci U S A; 2006 Nov; 103(47):17747-52. PubMed ID: 17095606 [TBL] [Abstract][Full Text] [Related]
18. An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem. Shmygelska A; Hoos HH BMC Bioinformatics; 2005 Feb; 6():30. PubMed ID: 15710037 [TBL] [Abstract][Full Text] [Related]
19. Multiplexed-replica exchange molecular dynamics method for protein folding simulation. Rhee YM; Pande VS Biophys J; 2003 Feb; 84(2 Pt 1):775-86. PubMed ID: 12547762 [TBL] [Abstract][Full Text] [Related]
20. Heuristic algorithm for off-lattice protein folding problem. Chen M; Huang WQ J Zhejiang Univ Sci B; 2006 Jan; 7(1):7-12. PubMed ID: 16365919 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]