349 related articles for article (PubMed ID: 18172436)
1. Predicting expression patterns from regulatory sequence in Drosophila segmentation.
Segal E; Raveh-Sadka T; Schroeder M; Unnerstall U; Gaul U
Nature; 2008 Jan; 451(7178):535-40. PubMed ID: 18172436
[TBL] [Abstract][Full Text] [Related]
2. Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials.
Kazemian M; Blatti C; Richards A; McCutchan M; Wakabayashi-Ito N; Hammonds AS; Celniker SE; Kumar S; Wolfe SA; Brodsky MH; Sinha S
PLoS Biol; 2010 Aug; 8(8):. PubMed ID: 20808951
[TBL] [Abstract][Full Text] [Related]
3. Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.
Rajewsky N; Vergassola M; Gaul U; Siggia ED
BMC Bioinformatics; 2002 Oct; 3():30. PubMed ID: 12398796
[TBL] [Abstract][Full Text] [Related]
4. Transcriptional control in the segmentation gene network of Drosophila.
Schroeder MD; Pearce M; Fak J; Fan H; Unnerstall U; Emberly E; Rajewsky N; Siggia ED; Gaul U
PLoS Biol; 2004 Sep; 2(9):E271. PubMed ID: 15340490
[TBL] [Abstract][Full Text] [Related]
5. Control of a genetic regulatory network by a selector gene.
Guss KA; Nelson CE; Hudson A; Kraus ME; Carroll SB
Science; 2001 May; 292(5519):1164-7. PubMed ID: 11303087
[TBL] [Abstract][Full Text] [Related]
6. Spatial bistability generates hunchback expression sharpness in the Drosophila embryo.
Lopes FJ; Vieira FM; Holloway DM; Bisch PM; Spirov AV
PLoS Comput Biol; 2008 Sep; 4(9):e1000184. PubMed ID: 18818726
[TBL] [Abstract][Full Text] [Related]
7. Direct integration of Hox and segmentation gene inputs during Drosophila development.
Gebelein B; McKay DJ; Mann RS
Nature; 2004 Oct; 431(7009):653-9. PubMed ID: 15470419
[TBL] [Abstract][Full Text] [Related]
8. Combinatorial binding predicts spatio-temporal cis-regulatory activity.
Zinzen RP; Girardot C; Gagneur J; Braun M; Furlong EE
Nature; 2009 Nov; 462(7269):65-70. PubMed ID: 19890324
[TBL] [Abstract][Full Text] [Related]
9. Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks.
Marbach D; Roy S; Ay F; Meyer PE; Candeias R; Kahveci T; Bristow CA; Kellis M
Genome Res; 2012 Jul; 22(7):1334-49. PubMed ID: 22456606
[TBL] [Abstract][Full Text] [Related]
10. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system.
Noyes MB; Meng X; Wakabayashi A; Sinha S; Brodsky MH; Wolfe SA
Nucleic Acids Res; 2008 May; 36(8):2547-60. PubMed ID: 18332042
[TBL] [Abstract][Full Text] [Related]
11. Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression.
He X; Samee MA; Blatti C; Sinha S
PLoS Comput Biol; 2010 Sep; 6(9):. PubMed ID: 20862354
[TBL] [Abstract][Full Text] [Related]
12. Decoding cis-regulatory DNAs in the Drosophila genome.
Markstein M; Levine M
Curr Opin Genet Dev; 2002 Oct; 12(5):601-6. PubMed ID: 12200166
[TBL] [Abstract][Full Text] [Related]
13. Large-scale turnover of functional transcription factor binding sites in Drosophila.
Moses AM; Pollard DA; Nix DA; Iyer VN; Li XY; Biggin MD; Eisen MB
PLoS Comput Biol; 2006 Oct; 2(10):e130. PubMed ID: 17040121
[TBL] [Abstract][Full Text] [Related]
14. Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.
Berman BP; Nibu Y; Pfeiffer BD; Tomancak P; Celniker SE; Levine M; Rubin GM; Eisen MB
Proc Natl Acad Sci U S A; 2002 Jan; 99(2):757-62. PubMed ID: 11805330
[TBL] [Abstract][Full Text] [Related]
15. Quantitative Measurement and Thermodynamic Modeling of Fused Enhancers Support a Two-Tiered Mechanism for Interpreting Regulatory DNA.
Samee MAH; Lydiard-Martin T; Biette KM; Vincent BJ; Bragdon MD; Eckenrode KB; Wunderlich Z; Estrada J; Sinha S; DePace AH
Cell Rep; 2017 Oct; 21(1):236-245. PubMed ID: 28978476
[TBL] [Abstract][Full Text] [Related]
16. Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura.
Berman BP; Pfeiffer BD; Laverty TR; Salzberg SL; Rubin GM; Eisen MB; Celniker SE
Genome Biol; 2004; 5(9):R61. PubMed ID: 15345045
[TBL] [Abstract][Full Text] [Related]
17. Development. The message is in the translation.
Richter JD; Theurkauf WE
Science; 2001 Jul; 293(5527):60-2. PubMed ID: 11441171
[No Abstract] [Full Text] [Related]
18. Characterization of the cis-regulatory region of the Drosophila homeotic gene Sex combs reduced.
Gindhart JG; King AN; Kaufman TC
Genetics; 1995 Feb; 139(2):781-95. PubMed ID: 7713432
[TBL] [Abstract][Full Text] [Related]
19. HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature.
Kvon EZ; Stampfel G; Yáñez-Cuna JO; Dickson BJ; Stark A
Genes Dev; 2012 May; 26(9):908-13. PubMed ID: 22499593
[TBL] [Abstract][Full Text] [Related]
20. A Hox Transcription Factor Collective Binds a Highly Conserved Distal-less cis-Regulatory Module to Generate Robust Transcriptional Outcomes.
Uhl JD; Zandvakili A; Gebelein B
PLoS Genet; 2016 Apr; 12(4):e1005981. PubMed ID: 27058369
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
