BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

102 related articles for article (PubMed ID: 1817252)

  • 1. Molecular dynamics simulation of trp-aporepressor in a solvent.
    Komeiji Y; Uebayasi M; Someya J; Yamato I
    Protein Eng; 1991 Dec; 4(8):871-5. PubMed ID: 1817252
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics studies of a DNA-binding protein: 1. A comparison of the trp repressor and trp aporepressor aqueous simulations.
    Howard AE; Kollman PA
    Protein Sci; 1992 Sep; 1(9):1173-84. PubMed ID: 1304395
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Molecular dynamics simulations of trp apo- and holorepressors: domain structure and ligand-protein interaction.
    Komeiji Y; Uebayasi M; Yamato I
    Proteins; 1994 Nov; 20(3):248-58. PubMed ID: 7892173
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The solution structures of Escherichia coli trp repressor and trp aporepressor at an intermediate resolution.
    Arrowsmith C; Pachter R; Altman R; Jardetzky O
    Eur J Biochem; 1991 Nov; 202(1):53-66. PubMed ID: 1935980
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiple helical conformations of the helix-turn-helix region revealed by NOE-restrained MD simulations of tryptophan aporepressor, TrpR.
    Harish B; Swapna GV; Kornhaber GJ; Montelione GT; Carey J
    Proteins; 2017 Apr; 85(4):731-740. PubMed ID: 28120439
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular dynamics studies of a DNA-binding protein: 2. An evaluation of implicit and explicit solvent models for the molecular dynamics simulation of the Escherichia coli trp repressor.
    Guenot J; Kollman PA
    Protein Sci; 1992 Sep; 1(9):1185-205. PubMed ID: 1304396
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Tryptophan replacements in the trp aporepressor from Escherichia coli: probing the equilibrium and kinetic folding models.
    Mann CJ; Royer CA; Matthews CR
    Protein Sci; 1993 Nov; 2(11):1853-61. PubMed ID: 8268796
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Refined solution structures of the Escherichia coli trp holo- and aporepressor.
    Zhao D; Arrowsmith CH; Jia X; Jardetzky O
    J Mol Biol; 1993 Feb; 229(3):735-46. PubMed ID: 8433368
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Crystallographic studies on E. coli Trp aporepressor.
    Joachimiak A; Zhang RG
    Acta Biochim Pol; 1989; 36(3-4):195-203. PubMed ID: 2485996
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The crystal structure of trp aporepressor at 1.8 A shows how binding tryptophan enhances DNA affinity.
    Zhang RG; Joachimiak A; Lawson CL; Schevitz RW; Otwinowski Z; Sigler PB
    Nature; 1987 Jun 18-24; 327(6123):591-7. PubMed ID: 3600756
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure and stability of an early folding intermediate of Escherichia coli trp aporepressor measured by far-UV stopped-flow circular dichroism and 8-anilino-1-naphthalene sulfonate binding.
    Mann CJ; Matthews CR
    Biochemistry; 1993 May; 32(20):5282-90. PubMed ID: 8499433
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Internal dynamics of the tryptophan repressor (TrpR) and two functionally distinct TrpR variants, L75F-TrpR and A77V-TrpR, in their l-Trp-bound forms.
    Tripet BP; Goel A; Copie V
    Biochemistry; 2011 Jun; 50(23):5140-53. PubMed ID: 21553830
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Thermodynamic studies of the interaction of trp aporepressor with tryptophan analogs.
    Hu DD; Eftink MR
    Biophys Chem; 1994 Apr; 49(3):233-9. PubMed ID: 8018820
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Resolution of the fluorescence equilibrium unfolding profile of trp aporepressor using single tryptophan mutants.
    Royer CA; Mann CJ; Matthews CR
    Protein Sci; 1993 Nov; 2(11):1844-52. PubMed ID: 8268795
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Flexibility of the DNA-binding domains of trp repressor.
    Lawson CL; Zhang RG; Schevitz RW; Otwinowski Z; Joachimiak A; Sigler PB
    Proteins; 1988; 3(1):18-31. PubMed ID: 3375234
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Luminescence studies with trp repressor and its single-tryptophan mutants.
    Eftink MR; Ramsay GD; Burns L; Maki AH; Mann CJ; Matthews CR; Ghiron CA
    Biochemistry; 1993 Sep; 32(35):9189-98. PubMed ID: 8369286
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Oligomerization of the EK18 mutant of the trp repressor of Escherichia coli as observed by NMR spectroscopy.
    Chae YK; Abildgaard F; Royer CA; Markley JL
    Arch Biochem Biophys; 1999 Nov; 371(1):35-40. PubMed ID: 10525287
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Free energy perturbation study on a Trp-binding mutant (Ser88-->Cys) of the trp-repressor.
    Komeiji Y; Uebayasi M; Someya J; Yamato I
    Protein Eng; 1992 Dec; 5(8):759-67. PubMed ID: 1287655
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Ions and counterions in a biological channel: a molecular dynamics simulation of OmpF porin from Escherichia coli in an explicit membrane with 1 M KCl aqueous salt solution.
    Im W; Roux B
    J Mol Biol; 2002 Jun; 319(5):1177-97. PubMed ID: 12079356
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Environment-dependent long-range structural distortion in a temperature-sensitive point mutant.
    Carey J; Benoff B; Harish B; Yuan L; Lawson CL
    Protein Sci; 2012 Jan; 21(1):63-74. PubMed ID: 22057811
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.